KEGG   Pimephales promelas (fathead minnow): 120485191
Entry
120485191         CDS       T08155                                 
Symbol
tnfa
Name
(RefSeq) tumor necrosis factor a (TNF superfamily, member 2)
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04010  MAPK signaling pathway
pprm04060  Cytokine-cytokine receptor interaction
pprm04150  mTOR signaling pathway
pprm04210  Apoptosis
pprm04217  Necroptosis
pprm04350  TGF-beta signaling pathway
pprm04620  Toll-like receptor signaling pathway
pprm04621  NOD-like receptor signaling pathway
pprm04622  RIG-I-like receptor signaling pathway
pprm04625  C-type lectin receptor signaling pathway
pprm04920  Adipocytokine signaling pathway
pprm05132  Salmonella infection
pprm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    120485191 (tnfa)
   04350 TGF-beta signaling pathway
    120485191 (tnfa)
   04150 mTOR signaling pathway
    120485191 (tnfa)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    120485191 (tnfa)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    120485191 (tnfa)
   04217 Necroptosis
    120485191 (tnfa)
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    120485191 (tnfa)
   04621 NOD-like receptor signaling pathway
    120485191 (tnfa)
   04622 RIG-I-like receptor signaling pathway
    120485191 (tnfa)
   04625 C-type lectin receptor signaling pathway
    120485191 (tnfa)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    120485191 (tnfa)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120485191 (tnfa)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120485191 (tnfa)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:pprm04052]
    120485191 (tnfa)
   00536 Glycosaminoglycan binding proteins [BR:pprm00536]
    120485191 (tnfa)
Cytokines and neuropeptides [BR:pprm04052]
 Cytokines
  Tumor necrosis fators
   120485191 (tnfa)
Glycosaminoglycan binding proteins [BR:pprm00536]
 Heparan sulfate / Heparin
  Cytokines
   120485191 (tnfa)
SSDB
Motif
Pfam: TNF
Other DBs
NCBI-GeneID: 120485191
NCBI-ProteinID: XP_039536724
LinkDB
Position
Unknown
AA seq 236 aa
MMEHDSEVLLGLEEGTLPLPRVMVSRRKADSSKSSNWRVCGVFLAVTLCAAAAVCFTLNK
SQSNQESGTGLRLTRDHFSKANFTSKAAIHLTGAYKPKDTNLDWKVNQDQAFSSGGLKLV
NREIIIPDDGIYFVYTQVSFHISCSTDKTQGDDAVYISHVVNRFSDSYGSSKSLFSAIRS
VCEHTPDTQDLTYNTIYLGAAFQLRARDRLSTETTPNLLHRVDNDNGKTFFGVFAL
NT seq 711 nt   +upstreamnt  +downstreamnt
atgatggagcatgacagtgaagtattgttgggtcttgaagaagggacgctgcctctacca
agggtgatggtgtcgaggaggaaggccgactcttcaaagtcaagcaattggcgagtgtgt
ggtgtttttctggctgtgaccctgtgtgctgctgctgctgtttgcttcacgctcaacaag
tctcagagtaatcaggaaagtggaactgggctcaggcttacgagagatcatttttcaaaa
gcgaatttcacttccaaggctgccatccatttaacaggtgcatataagcctaaagacaca
aaccttgattggaaagtgaaccaggaccaagctttctcttcaggcggcttgaaattagta
aatagggagatcatcattcctgatgacggcatttacttcgtctacacccaggtctctttc
cacatcagttgctcgactgacaagacgcagggcgacgacgctgtgtatataagccacgtg
gtgaatcgcttttccgattcctatggaagcagtaagtcgcttttcagcgctatccgctcc
gtgtgcgaacacacgcctgacactcaagacctgacgtacaacacaatttacctcggcgcc
gccttccagttacgagcccgagacagactgagcaccgaaaccactccaaatctcctgcac
cgcgtcgacaatgacaatggaaagaccttctttggggtgtttgctctatga

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