Pimephales promelas (fathead minnow): 120485522
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Entry
120485522 CDS
T08155
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
KO
K06752
MHC class II antigen
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04145
Phagosome
pprm04514
Cell adhesion molecules
pprm04672
Intestinal immune network for IgA production
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120485522
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120485522
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120485522
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120485522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120485522
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120485522
Exosomal proteins of epithelial cells
120485522
Exosomal proteins of breast milk
120485522
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Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
DUF5562
Motif
Other DBs
NCBI-GeneID:
120485522
NCBI-ProteinID:
XP_039537273
LinkDB
All DBs
Position
Unknown
AA seq
265 aa
AA seq
DB search
MTSKTQYNLVVHLTVFLSALIETVHGHYGYVQILCRTDSQQNTEFIYSVTYNMIEYLRYN
STEDIVIGYTEFGKKWAEDYNKNKILLAQAEFALKDCKEIGKFIFPYAGTAVKPEVIIRS
DREAIGNQKAVLVCSAYDFYPKPIKLTWIRDDIVMTADVTSTEELADGDWYYQIHSHLEY
FPKPGEKISCVVEHASSHRPMVYHWDPSLSESERSKIILGSVGLVMGVVMAAGGLIYHKR
KHTGFYRLPVCLLPLQTMDGTEQQP
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaaaaacgcagtacaacctagtggtacatttgaccgtgtttttgtctgcttta
attgaaacagttcatggacattacggatatgtccaaattctctgtcgaactgactctcaa
caaaacactgaatttatctactcggtcacctacaacatgatagaatatctgagatacaac
agcactgaggatatagttattggttacactgaatttggaaagaaatgggcagaggactac
aataaaaacaagattttactcgcacaagcagaatttgctctgaaagattgcaaagaaatt
ggaaaatttattttcccttatgcagggacggcagtaaaaccagaagtaattatccggtca
gacagggaagctattgggaatcagaaagctgttctggtgtgcagtgcctatgacttctac
cccaaacccatcaaactgacgtggataagggatgatattgtgatgacagctgatgtgacc
tccactgaggagctggctgatggagactggtactaccagattcactcccacctggaatac
tttcccaaacccggagagaagatctcctgtgtcgtggagcacgccagctctcatagaccc
atggtctatcactgggatccttctctatccgagtctgagaggtctaagataattcttggg
tctgtggggctggtgatgggggtcgtgatggcagccggaggactgatctaccataaaaga
aaacacacaggcttttaccgacttccagtttgtttacttccactgcaaacaatggacggc
actgaacaacagccgtaa
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