Pimephales promelas (fathead minnow): 120485523
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Entry
120485523 CDS
T08155
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
KO
K06752
MHC class II antigen
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04145
Phagosome
pprm04514
Cell adhesion molecules
pprm04672
Intestinal immune network for IgA production
pprm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120485523
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120485523
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120485523
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120485523
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pprm04147
]
120485523
Exosome [BR:
pprm04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120485523
Exosomal proteins of epithelial cells
120485523
Exosomal proteins of breast milk
120485523
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
C2-set_3
Motif
Other DBs
NCBI-GeneID:
120485523
NCBI-ProteinID:
XP_039537274
LinkDB
All DBs
Position
Unknown
AA seq
252 aa
AA seq
DB search
MSVRKFLIFHPILMLSAFIGTADGYYEYMKHECIYSTSDYSDMVYLLSKSFNKVVDVQFN
SSVGKCVGYTEEGVKYAENWNKDQAIMQQYKAAVDRFCRYNAQIIDSNVRDKAVKPEVTL
SSVKQAEGNHPAVLMCSAYEFYPKKIKVSWLRDGKLMTSDVTSTMEMADGDWYYQIHSEL
EYTPKSGEKISCVVEHASSPQPIVKDWNPSMPDIERNKIAIGSSGLVLGIIIAAAGLIYY
KKKSSGRILVPN
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgcgaaaatttttgatttttcatcccatattgatgctgtctgcatttattgga
acagctgatggatattatgaatacatgaagcatgaatgcatctacagcaccagtgattac
agtgatatggtgtatcttctgtcaaagtccttcaataaagttgtggatgtacaatttaac
agctctgttgggaagtgtgtggggtacactgaggaaggagtgaagtatgcagagaactgg
aacaaagatcaggccattatgcagcagtataaagctgcggtggacagattctgcagatat
aatgctcagatcattgactcaaatgtccgtgataaagcagtaaaaccggaggttacactc
agttcagtgaagcaggctgaaggcaatcatccagctgtgttgatgtgcagtgcatatgaa
ttctacccaaaaaaaatcaaagtgtcctggctgagagatggtaaactgatgacctcagac
gtgacctcaacaatggagatggctgatggagactggtactaccagattcactctgagctg
gaatacactccgaaatctggagagaagatctcctgtgtggtggagcacgccagctcacct
caacctattgttaaagactggaatccctctatgccagacattgagaggaataaaatcgct
attggatcctctggtctggtgctgggaattatcattgcagctgctggactcatttactac
aagaagaaatcatcagggaggatcctggtgccaaactga
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