KEGG   Pimephales promelas (fathead minnow): 120485524
Entry
120485524         CDS       T08155                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, I-E alpha chain-like
  KO
K06752  MHC class II antigen
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04145  Phagosome
pprm04514  Cell adhesion molecules
pprm04672  Intestinal immune network for IgA production
pprm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120485524
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120485524
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120485524
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120485524
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120485524
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120485524
  Exosomal proteins of epithelial cells
   120485524
  Exosomal proteins of breast milk
   120485524
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_2 Ig_3 ig C2-set_2 C2-set_3 I-set Beta-prop_IFT140_1st Citrate_bind
Other DBs
NCBI-GeneID: 120485524
NCBI-ProteinID: XP_039537275
LinkDB
Position
Unknown
AA seq 236 aa
MEMYGVLLMLAVIVRTETQVVHRDVQFSGCSDKEKEYLMGFDGEEIFHADFIRKEGVMTL
PDFGDPISYPGGYENGVSEMEICKQNLDLDIKVYKPSVEQLDIPDTSIYPKAVVLQDAEN
TLICHVTGFFPPPVNVSWTKNNQIVTEGMSLSQYRLKDDGTFNIFSTLKFTPKEGDIYSC
TVNHKSIPGQPITKTWDVDVALPSVGPDVFCGVGLTLGLLGVAAGTFFLIKGNNCN
NT seq 711 nt   +upstreamnt  +downstreamnt
atggagatgtatggtgtcctgcttatgctcgctgttattgtgagaactgagactcaagtt
gtgcacagggatgttcaattttctggatgttctgataaagagaaagaatatttaatggga
tttgatggagaggaaatattccatgcagacttcattagaaaagaaggagtaatgacgctg
cctgactttggagatcctatcagctatcctggaggttatgagaatggtgtttctgaaatg
gagatctgcaaacaaaacttagacttagacattaaagtctacaaaccctcggttgaacaa
ctagacatcccagatacatccatctatccaaaagctgttgtgttgcaggatgccgagaac
acccttatctgtcatgtgactggattcttccctccacctgtcaatgtgtcttggactaaa
aacaatcagattgtgacagaaggcatgagtctaagccagtaccgcttaaaagacgacggc
accttcaacatcttctctactctgaagttcacgcctaaagagggagacatttacagctgc
actgtgaaccacaaatccattccaggccaacctataaccaaaacatgggatgttgacgtt
gccctccccagtgttggtccagatgtgttctgtggagtgggtctgactctgggactgctg
ggagtcgctgctggaactttcttcctcattaaaggaaacaactgcaactga

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