KEGG   Pimephales promelas (fathead minnow): 120485533
Entry
120485533         CDS       T08155                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04145  Phagosome
pprm04514  Cell adhesion molecules
pprm04672  Intestinal immune network for IgA production
pprm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120485533
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120485533
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120485533
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120485533
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pprm04147]
    120485533
Exosome [BR:pprm04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120485533
  Exosomal proteins of epithelial cells
   120485533
  Exosomal proteins of breast milk
   120485533
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 VTC C2-set_3
Other DBs
NCBI-GeneID: 120485533
NCBI-ProteinID: XP_039537294
LinkDB
Position
Unknown
AA seq 257 aa
MRHNLVIHLALLLHTLFETVHGHYGFVLYLCRVLGSLQNVEVIYSIYFDKTEFLRFNSTE
NKFVGYTEYAMKWADDFNKKPDWLHKESEKSIADCKLYGQILTMFEKTVKPQVIVRSVRQ
ASGKSPAMLICSAYDFYPKPIKLTWMRDDKAMTADVTSTEELADGDWYYQIHSHLEYFPK
PGEKISCVVEHASSHRPMVYHWDSSLSESDRNKMITGAAGVVLGVIMAAGGLIYYKRKHT
AHVISAGSKYIRCSEPL
NT seq 774 nt   +upstreamnt  +downstreamnt
atgcggcataatcttgtgatacacctggccttgttgttgcatactttgtttgaaacagtt
catggacattatggattcgtcctatatctctgccgtgtacttggttctctacaaaatgtt
gaggtcatctactcaatatattttgacaaaactgaatttctgagatttaacagtactgaa
aataaatttgttggttacactgaatatgcgatgaaatgggccgatgattttaataaaaaa
cctgattggctacataaggagtcagagaaatccattgccgattgcaagctctatgggcaa
atcctcactatgttcgaaaaaacagtaaaaccacaagtcatcgtcaggtcagtaaggcag
gccagtggtaaaagtccagccatgttgatctgcagtgcctatgacttctaccccaaaccc
attaaactgacgtggatgagggatgataaagcgatgacagctgatgtgacctccactgag
gagctggctgatggagactggtactaccagattcactcccacctggaatactttcccaaa
cccggagagaagatctcctgtgtcgtggagcacgccagctctcatagacccatggtctat
cactgggattcatctctgtcagagtctgacaggaataagatgataactggagctgcaggt
gtggttttgggggtgatcatggcagcaggagggctgatctactacaaaagaaaacacaca
gcacatgtcatatcagctggaagtaaatacattagatgctctgaaccgctgtag

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