Pimephales promelas (fathead minnow): 120486460
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Entry
120486460 CDS
T08155
Symbol
si:ch1073-335m2.2
Name
(RefSeq) msx2-interacting protein isoform X1
KO
K25100
Msx2-interacting protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120486460 (si:ch1073-335m2.2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pprm03036
]
120486460 (si:ch1073-335m2.2)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
120486460 (si:ch1073-335m2.2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_5
RRM_YTH1
RRM_7
RRM_ACIN1
Motif
Other DBs
NCBI-GeneID:
120486460
NCBI-ProteinID:
XP_039538443
LinkDB
All DBs
Position
Unknown
AA seq
3146 aa
AA seq
DB search
MVRETRHLWVGNLPEHVREEKIVEHFKRYGRVESVKVLRKRGSEGGVAAFVDFVDIKSAQ
KAHNAVNKMGDRDLRTDYNEPGSVPSAVRGLEDAAPASAHGREVAGFSRSAVGPVYGPPV
TLHTREGRYERRLDGSGSDGRERAYEHSPYGHHERSGSFERPRHYNTDYYRDRTMFAGSS
PAASALSGGFDATESHFEPRIRDPFTLSGSARRDPYRDDRGRRADRTYHHHRRSRSSHSS
QSRQPSPQRSAGHTPKAAHSPKRAPASPGPRSRSRSASSSSDSASSTSSTGSGSSDSNSS
SSEGSRARSVQSTATHAPPAPALPMDSDEPRRSFGIRVQNLPTRSTDTSLKDGLFHEFKK
YGKVTSVQIHGALEERYGLVFFRQQEDQEKALSVSKGKLFFGMLIEVTAWNGPETESENE
FRPLDGRIDEFHPKATRTLFIGNLEKTTNYQQLLDVFQRFGEIVDIDIKRVNGIPQYAFV
QYSDIASVCKAIKKMDGEYLGTNRLKLGFGKSMPTACVWLDGLTSNITEQYLTRHFCRYG
PVVKVVFDRLKGMALVLYNNTDFAQAAVRETKGWKIGGNKIKVDFASQESQMAFYRSMQA
SGQDIRDFYDIPAERREERRTPYHEFSAERAYYENVRTPGIYAEDPRREYPGRSRDRYAE
LDHYQGEHYDPRYHEDPREYRDYRDPFEDIRKYSYIQRERERERERFEADRGRWSPSHQR
RPLTPSASPSPSERVSREAERRVYRHSSERSGSCSSLSPPPAQFEKSEKSPVDYKPEGLE
REMEPTEAERTSGAENKKRGRRKEKADREKGEKAKQRRGKAQSPSVPNSEADREPSLDLG
SGKGKVSDVESQERQKHKGDKEPSPVDHVTRLEPQKGERLDQGKSESSDRDGKGKSKKHL
KSDSGSDGKDSLLDSDRLAARKRRFGDPSGKTIRQKRGRLEDDSGSGISQPADFATNTGF
AKETDSDLKAEKEAQKREHSKSRTGPHYSQRDELDSTMRGSLRPGELSEVDVLDSKSHPV
PRRFSVDGTSDKDSKVRDEYLENIDLSQSYRKQMEQNRRLRQQLQTPDKQGKADSQQGID
AEDLEHRSLVHEVGKPPQDVTDTSPPNKIKKQESFEMEMSAKRERIYRTGRQKSEDPEWN
NTSSPRFQHAPLLREVEYAEPSTQVTVREVKEPLKPEDNVQLDLELAGKRMHTVQMSKMS
TSLPDEQQRRWESRLKQELLPDFSRGPEKRRLNRKYLDYGLWPDLEPGEVRSDSEEDREN
KSNSPAPSTSVSFSERHRPDRLSESKLTSALERNKFRSFADDQTITPDTKALLERAKSLS
SSREDNWSFLDYDTHFASLRSRKDTEKVESAPRPTPSWYMKKKKIRSESDDKVEERKEDP
KPEEQERRELFASRFLHSSIFEQDSRRLQHLERKHEDPEHGVGYLYPQQGPTEGQPDPEP
VVLFHSRFLELTRLQQQKNKEQIPQNSKHEETVDTTRGSKTPEEEQAPQQQIATEPTIHP
AESKTISPVQAPQTSPVQAPQISPPAIIAKESLPSVETACVDTPAYNLFDPSMKEEDKEH
EQPSAQPLQPLLEQPSEPNCSECQESKIPVEEMELKTNDFESAPETNKVVSEQLSSNETP
PSVSQPETESPVKSPVKFPESPSPLSQISSEPHEKEPEPPVTEAESINTGDQKVADNYPV
EEAVSPPPKPRNKKTKTSPSTPVTATLPATPDKQSTRKSERIDKEKLKRSSSPRGEASKA
VTDSKSLSKSPVHSVEMEQGTEQNSQPVRARRRNVRSVYATPVEDETALQPGRDAESPRV
RKRVDRDVGSDVETVAAPPPTSRRGRPPKNRRQADDVPAGKSERSKSTESKELDASETSS
EGVSKVGKGKSSPHTQKGVSPVNVPASGIGKKGDKMEKISESSKVITEENSLVLKNLTIR
LDVTEVKAILQTSEDEPGTEDSAKKSSPGVSSKDEVIESKFESDAMDEVNSEGGALPAAV
KAIESDVSLLSRELELEQAVENIAKLTEDPSPPPPPPPQFKSNLTKVQRSLPEEPERDSE
EKPAIPSSETELAAAIDSITAEETSCTLPQEQIINSVADSNADIQTLASSSKVSETCVGA
ADVQEEIVTSPRKGFKGRAKASKKGKGQKVAGSKKEPFKDVVLDAESIPVKSPESKPAEL
PTVKERSPTSTAVVITSSSKQVVTLTAPNADVPHEPELPLKTEMDIAKSSPAPSRSPTSP
YSYKNMSPSLSPTRTCLKSLSSYPSRLSVSPTERFNPPKEAGVLSPPQTPLESPTLPSDT
TVHDANSGDLRKILTKPRTGPVLDIAATSGNLHPLSARESDITPDVVTSKSAHQDNRQPS
VSAQPVVRQPASIPSPETKQIFSEKSVISVIASTPTSVISRVCNPPDSEEKPNAPIGNPF
LDKQPPKQIYQPSLEESSTYHGPPVGEEGGNAGRYIVESTSLSSGSSTGLRVQTSEGVVV
LSHSGQKMEGPHRISAKISQIPPASAVDIESQQLVSMPQIKQEPYSASQTPSSKCPLPSD
HGHSIKPQLNVSAIKQESALDKLESSYAPVQSGVVKLLQQTPGTSVMSYHHTIMKHPKKV
DGSESLGVDGVKPAWVPTISPAISPHLPPAAGNHVGFIAGTQTDRTPSLIQPKQEPRSPR
KSGHPHSPFAKVSSPIGSSSPKGVSMVLSSGLPSLSPYVSTVHHSEQSVIMPPHNAHSSI
GRMSPHRVGPIGHLTPGEVRVNTPPLSMMNYAIHSESLTSSWPPGQQRPISPQAVGNREM
VLKVNTANARGHDGEEEARRFHTALGRPAAQLKPDSIPAEYRGALPSGLPIDRFNMSPRE
MRVLIHHQQSDRPTAELHQVPENMPTSSTPTSMASSLSPRPHLLAKGVSEKDPSKTSELR
RAQTPPSKEGMMAIRSAMPPMASPQRVQLMAPGAGTSFPEYSNMYTNLRPTHAQFADNSP
MGINQSTHSIPPSQGVQEPESSQPQAEAKVELVGHQPVNMVQLLTKYPIVWQGLLALKND
TAAVQLHFLCGNKALGLRSLPLPESGGILRIVQRMRLEAQQLEGVARRMTGESDFCLLLA
MPCGVNQDDVLNQTQALKSAFINYLQAKLAAGIINVPNPGSNQPAYVLQIFPPCEFSESH
LSRLAPDLLSQISNISPHLMIVITSV
NT seq
9441 nt
NT seq
+upstream
nt +downstream
nt
atggttcgggaaaccagacacctctgggtgggaaatttacccgaacatgttcgcgaagag
aagattgtggagcattttaaacggtatggccgggtggagagcgtcaaagtcctgcgcaag
cgcggctccgagggcggcgtggcggcctttgtggatttcgtcgacatcaaaagtgctcag
aaggcgcacaacgccgttaacaaaatgggggacagggaccttcgcaccgattacaatgag
ccgggttcggtgcccagcgccgtgcgcggtctggaggacgccgcgcccgctagcgctcac
ggaagggaggttgcagggttctcgaggagcgccgtggggccggtgtacgggcctccggtg
actctccacaccagagaggggcgctatgaacgcagactagacggcagcggttctgacgga
cgggaacgggcgtacgagcacagtccgtatggacaccacgagcgcagcggctccttcgag
cggcctcgccactacaacacagactattacagggaccgcaccatgttcgctggctccagc
ccggctgctagcgctcttagcggaggcttcgacgcgaccgagtctcactttgagcctcgg
atccgggaccccttcaccctgtctggttccgctcgccgcgacccgtaccgtgacgacagg
ggccggcgcgcggaccggacgtaccatcaccatcggcggagccggtcgtcacactcgtcg
cagtcgcggcagccgtcgccgcagaggagcgcgggacacacgcctaaagccgcgcactcg
cccaagcgagccccggcgtctccgggtccgaggtctcgctcgcgcagcgcgtcctccagc
tccgactccgctagcagcaccagcagcaccggcagcggcagcagtgactcgaacagcagc
tccagcgaaggctcgcgggcgcgctcagtgcagtccacggccactcacgctccgcccgcg
ccggcgctccccatggactctgatgagccgcgcaggagcttcggcatccgcgtccagaac
ctgcccacgcgctccacagatacgagtctgaaggacgggctgttccacgagttcaagaag
tacgggaaggtgacgtcggtgcagatccacggcgcgctggaggagcgctacggcctggtg
ttcttccggcagcaggaggaccaggagaaggccctcagtgtgtccaagggcaagctgttc
ttcgggatgctgatcgaggtcacggcctggaacggccccgagaccgagagcgagaacgag
tttcggcccctggacggccgcatcgacgagttccaccccaaggccacgcgcacgctgttc
atcgggaacctggagaagaccaccaactaccagcagctgctcgacgtcttccagcgcttc
ggggagatcgtggatattgatatcaagagggtgaacggcattccccagtatgcatttgtt
cagtactccgatattgcaagtgtttgtaaagccattaagaagatggatggagagtatctc
ggcaccaacagactcaagcttgggttcgggaagagtatgcccacagcgtgtgtgtggctg
gacggcctgacctccaacatcacagagcagtatctcacgcgccacttctgtcgctacggg
cccgtcgtcaaggttgtgtttgataggttaaaaggaatggctcttgttctgtacaacaac
actgatttcgcccaagcagctgttagagaaaccaaaggatggaagataggagggaacaaa
attaaggttgattttgccagtcaggagagtcaaatggctttctatcgatctatgcaggcg
tcagggcaggacatccgtgacttttatgatattccagcagagaggagggaagagcgacga
actccttatcatgagttttcagccgagcgggcgtattacgaaaatgtaaggactcctggc
atttacgccgaagacccccgtcgggaatatcctggtcgcagtcgcgatcgctatgcagag
ttggatcattaccaaggagaacactacgatccccgctaccacgaggacccacgggaatac
agagattatcgagacccttttgaggacatcaggaagtacagctacatccagcgggaacgt
gaacgggagcgtgagcgatttgaggccgaccgaggcagatggagcccgtctcatcagcgg
cgtcccttaactccctctgcttcgccctctccgtctgaacgcgtgtctcgagaagcggaa
cgacgggtgtatagacactcctctgagagatctggaagctgcagctcgctatctccacct
ccagctcagtttgagaagtctgagaaatcgccagtggattacaaaccggaaggactggag
agagaaatggagccgacggaggccgagcgcacgagtggagccgagaacaagaaacgtggc
agacgcaaagaaaaggctgaccgagagaagggagagaaagcaaagcaaaggagagggaaa
gcacagtctcccagtgtacctaattctgaagcggatcgagagcctagtttggatttgggt
tctgggaagggaaaagtttcagatgtggagagtcaagaaagacaaaagcataaaggggac
aaagaaccctccccagttgaccacgtaactcgccttgagcctcaaaagggagagcgactc
gatcaaggtaaaagtgagtcgtcagaccgggatggcaaaggaaagtcaaagaagcattta
aagtctgactctggtagtgatggcaaagattcccttttggattctgacagacttgcagcg
agaaagaggcgttttggtgatcccagtgggaaaactataaggcagaaaaggggccgtcta
gaggatgattcaggttctggaattagccaacctgctgactttgctacaaacaccggattt
gcgaaagagaccgatagtgatctgaaagctgagaaagaggctcaaaaaagagaacactcc
aaatccaggactggccctcattatagtcaaagggatgagctggatagcactatgagaggg
tccttacgaccaggggaattgtctgaggtagatgttttggactcaaaatcgcaccctgtg
cctagacgattttcagtcgacggcacctccgataaggacagcaaagtaagggacgaatat
ctagaaaatattgacctttctcagagttaccgcaaacagatggagcaaaacaggcggctt
cggcagcagctgcagacccccgataaacaaggaaaggcagattctcagcaaggtatagat
gcagaagatcttgagcatcgcagcctggtgcatgaggttggcaagcctccgcaggatgta
accgatacctcgcctccaaataagattaagaaacaagagtcctttgagatggaaatgagc
gctaagagagaaaggatttaccgaacaggtcgccaaaagagtgaagaccctgagtggaat
aacacaagttctccgaggtttcagcatgcaccgctactaagagaggtagaatatgctgag
ccttctactcaagtgactgtgagagaagtaaaagaaccattaaagcctgaagataatgtt
caattagatctggagctcgctggtaaacggatgcacaccgtacagatgtcaaagatgagt
acatctctaccagatgagcagcaaagacgttgggagagtcgactaaagcaagagttgttg
ccagacttttcaaggggccctgagaaaagacgtctcaatcggaagtacctggattatgga
ctttggcccgatttggagcctggtgaagtgcgttctgactctgaagaggatcgtgaaaat
aaatccaactctcctgctccatcaacttctgtgtccttctctgaaagacatcgtccagac
aggttgtcagagtccaagctaacatctgccctagagagaaacaaattccgttcttttgca
gatgatcagacaatcacaccggatactaaagcgttgttggagcgtgcgaagtctttgtcg
tcctcaagagaagacaactggtctttccttgattatgatacacattttgccagtttaagg
agtagaaaggacacagaaaaggtagagtcagccccacgaccaactccctcatggtacatg
aagaagaaaaaaattcgaagcgagtctgacgacaaagtggaggaaaggaaagaagatcca
aagccagaagaacaggagagacgagagttgtttgcatcacgttttttgcacagttctatt
tttgagcaggattcaagacgtctccagcatctggaacgaaagcatgaggaccctgagcat
ggtgttggatatctgtaccctcagcaaggcccaacagaagggcagcctgacccagaacca
gttgtgcttttccatagccgctttttggagcttacaaggttgcagcaacagaagaataaa
gaacaaatccctcagaattccaagcatgaagaaaccgtagatacaaccagaggaagtaaa
acaccagaggaagaacaagctccacagcaacaaatcgctactgaacctactatccatcca
gctgagagtaaaactattagccctgttcaggctcctcagactagtcctgtccaagctcct
caaatatcaccacctgctataatagccaaagaatccttgccatcagtggaaacagcatgt
gttgatactcctgcctataatttgtttgatccttccatgaaggaggaagataaagagcat
gaacagccctcagctcagccattacagcctttgctagagcaaccctcagaacctaattgt
tcagagtgccaagagtcaaagatcccagtcgaggagatggaattgaagactaatgacttt
gaaagtgcccctgaaaccaacaaagtggtttcagaacagctttcaagcaatgaaacacca
cccagcgtttcacaaccagagactgagtctccagtgaagtctccagtgaagtttccagag
tcaccaagtcccctctcacaaatctcttctgagccacatgaaaaggaacctgagccacct
gttacagaagcagaatctatcaatacaggtgatcagaaagttgctgataattatccagtt
gaggaagctgtgtctccccctccaaagccaagaaataaaaagactaaaacctctcctagc
actccagtaactgcaactctgcctgctaccccagacaaacagagtacccgcaaaagtgag
cgcattgacaaagaaaaactgaaacgctcatcttctccaagaggagaggcatccaaggca
gtgaccgattcaaagtcattaagtaagtcccctgtgcacagcgtagaaatggagcaaggt
acagagcaaaattcccagccagttagggcaaggcgtaggaatgtgcgctctgtttatgcc
acaccagttgaagatgaaactgctctgcaacctggaagagacgctgaatcacctcgtgta
aggaagcgtgtagacagagatgtgggttctgatgtagagactgttgctgcaccaccaccg
acctcaagacggggacgcccccccaagaatcgacgccaagctgatgatgtgccagcagga
aaatctgaacggtcaaaatcaactgagtctaaggaattggatgccagtgagacgagcagt
gagggggtttctaaagtaggtaaaggcaaatcttcaccccacacacaaaaaggagtaagt
ccagtgaatgtacccgcatctggaattggaaaaaagggggacaaaatggagaaaatttca
gaaagctccaaagtcatcactgaagaaaactctcttgttcttaaaaaccttacaattcgg
cttgatgtgacagaggtgaaggcaatccttcagactagtgaagatgaacctggtactgag
gattctgccaaaaagagctcacctggggtgtcttcaaaagatgaggtaatagaatctaag
tttgaaagtgatgccatggatgaagttaatagtgaagggggtgcattgcctgctgcagta
aaagccattgaatcagatgtatctttgctgtctcgagagctggaacttgagcaagctgtt
gagaatattgcaaagctgacagaagatccatctcctcctcctcctcctcctcctcagttt
aaaagtaacttgacaaaggtgcaacgttcattacctgaagaaccagagcgtgactcagaa
gaaaagcctgcaattccatctagtgaaacagagcttgccgctgctatagattccattaca
gcagaggaaacttcttgtacccttccacaagagcaaatcatcaactctgttgccgattca
aatgctgatatacagacccttgcctccagttcaaaagtatctgaaacatgtgttggcgca
gcagatgttcaggaggagatcgtaacctctcctagaaaagggtttaaaggcagagcaaaa
gcttcaaagaagggcaaaggccaaaaagttgctggaagcaaaaaagaaccattcaaggat
gtagttttggatgctgaaagcatccctgttaagtcaccggagtccaaacctgcagaactt
ccaactgtcaaagaaagatcacccacaagtacagctgtagtcattacttcatcttccaag
caggttgtaactttaacagcgcctaatgcagacgttccacacgaaccagagttgcctctt
aaaactgagatggatatcgcaaaatcttctcctgctcccagcagaagcccgacgtcacct
tattcatacaaaaacatgtccccctcactgtctccaacaagaacttgcctcaagagtttg
tcctcatacccaagcaggctttctgtttcccctacagagcgtttcaatccaccgaaagaa
gctggggtcctctcccctccacagacccctttagagagcccaacattaccctcagacacc
actgtacatgacgccaactctggtgatttgcgtaaaatcctcacaaagcctagaactggc
ccagtgttggacattgccgctacatctgggaatctgcatcctctttctgcaagggaaagt
gacattacaccagatgtggtgacaagcaaaagtgctcatcaagataacaggcaaccctcc
gtttcagcccaacctgtagttcgacagcctgcctctatcccatccccagaaacaaagcag
atctttagcgagaagtcggttatctcagttattgcttccactcctacctctgtcatcagt
cgagtttgcaatccccctgactctgaggagaagccaaatgctcccattggaaatcccttt
ctcgacaaacaacctccaaaacagatttaccagccaagcttggaggaaagcagtacgtac
catggtccaccagtcggcgaggaaggtggaaatgctggtcgttatattgtggagagtaca
tcgctgagctcaggttccagcacagggctgagagttcagacgtcagaaggtgtggtggtg
ctgagtcattctggccagaaaatggagggaccacatcgcataagtgccaaaatcagccag
atcccaccggccagtgctgtggacatagagtcccagcagctggtgtccatgccccagatc
aagcaggaaccctacagtgcctcccaaacaccatcttcgaaatgcccactcccttcagat
catgggcattcaattaaaccacagctaaatgtctccgcaattaaacaagagtctgcactg
gacaaattggagtcctcttacgccccagttcaaagtggagttgttaaattattgcaacaa
acgcctggcacatcggtcatgagttaccatcatacaattatgaagcaccccaaaaaggta
gatgggtcagagtccctcggcgtggatggcgtgaaacccgcctgggtcccaactattagc
cctgctataagtcctcatcttcccccagcagcgggcaatcacgtcgggttcatagctggc
acacagacagatcgaactccctcgcttattcaacctaagcaggagccgcgatctccccgg
aaatcgggacaccctcattctccatttgccaaagtgtcgtctccaatcggctcctcatct
ccgaaaggtgtgtctatggtcctttcctctggattaccctctctgtccccgtatgtgtcc
actgtccaccactctgaacagtctgtgatcatgcccccacataacgctcacagcagcatt
ggacgaatgtcgccacaccgcgtgggcccgatagggcaccttactccgggcgaggtacga
gtgaacactcctcctctttctatgatgaactatgccattcactctgagagcctcacctca
tcttggccacctgggcagcagagacccatatccccccaggccgtagggaacagggaaatg
gtcctcaaggttaacacagccaatgcaagaggccatgatggagaagaagaagcaaggcgt
ttccatacagctctcggaagaccagctgctcaactgaaaccagattccattccagcagag
tatcgtggagctctccccagtggtttacccatcgatcgattcaacatgtcacccagagaa
atgcgagtactcatacaccaccagcagagcgatcgtcccactgcggagctgcaccaggtc
ccagagaacatgccgacttcttcaactccgaccagcatggcgtcatctctctcacctcgg
ccacacttgttagcaaagggagtgtctgagaaggacccctcgaaaacatctgagctgagg
agggcacagacacctcccagtaaggagggaatgatggcgattcgtagtgcaatgcctcca
atggcttctcctcaaagagttcagctgatggcaccaggagctgggacgtcctttcctgaa
tattccaacatgtatacaaacctacggcccacccacgctcagtttgctgataattctcca
atggggattaaccagtccacccacagcatcccaccatcgcagggagttcaggagccagag
tcaagtcagcctcaagctgaagctaaagtggagttggttggacatcagcctgtgaacatg
gtgcaacttctgacgaaataccccattgtgtggcaaggcctgctggcgctgaagaacgac
accgccgcggtgcagctgcacttcctgtgtgggaacaaggctctgggcctgcggtctctg
cctctgccggagagcggcgggatcctgcgtatcgtgcagcggatgaggctggaggcgcag
cagctcgagggcgtcgcgcgcaggatgacgggggagagtgatttctgcctgctgttggcc
atgccgtgtggcgtcaaccaggacgacgtgctgaaccagacgcaggcgctcaaatctgcc
ttcatcaattacctgcaggccaaactagcggctgggatcatcaacgtgcccaaccccggc
tccaatcagccggcgtatgtactgcagatcttcccgccgtgcgagttctccgagagtcac
ctgtcccgcctggccccggacctgctgagccagatctccaacatctccccgcacctgatg
atcgtcatcacctctgtgtga
DBGET
integrated database retrieval system
