KEGG   Pimephales promelas (fathead minnow): 120487107
Entry
120487107         CDS       T08155                                 
Name
(RefSeq) methionine synthase-like isoform X1
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm00270  Cysteine and methionine metabolism
pprm00450  Selenocompound metabolism
pprm00670  One carbon pool by folate
pprm01100  Metabolic pathways
pprm01230  Biosynthesis of amino acids
pprm04980  Cobalamin transport and metabolism
pprm04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    120487107
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    120487107
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    120487107
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    120487107
   04980 Cobalamin transport and metabolism
    120487107
Enzymes [BR:pprm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     120487107
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-GeneID: 120487107
NCBI-ProteinID: XP_039539249
LinkDB
Position
Unknown
AA seq 1309 aa
MCACASVHVSVCACAAVLHVLHRSLPKESLRVFAGRPHRFSQCLGTSFASMPPTIHRGST
AAGRAPSLRDELEQLLHQRILVLDGGMGTMIQQRNLEEEDFRGQEFKGHPKSLKGNNDLL
SITQPDVIYSIHKEYLEAGADLIETNTFSSTSIAQQDYGLEDLAYRLNKASAELARRAAD
DVTAQTGCKRFVAGALGPTNKTLSVSPSVERPDYRNITFDELVEAYEEQVKGLLDGGADV
LLVETIFDTANAKAALFAIDRLFEESYEPRPVFISGTIVDKSGRTLSGQTGEAFVISMSH
AQPLCIGLNCALGASEMRPFIEAIGKSTGAFVICYPNAGLPNTFGGYDETPEVTAGHIKE
FAVDGLVNIVGGCCGTTPDHIRAIAESVSHVKPRVPPTDVFRDYMLLSGLEPFRIGPYTN
FVNIGERCNVAGSRRFAKLIMAGQYEEALSIAKAQVEMGAQVLDINMDEGMLDGCAAMTR
FCNLISSEPDIAKVPLCIDSSNFAVIEAGLKCCQGKGIVNSISLKEGEEEFLRRARLVRR
YGAAVVVMAFDEEGQATETDQKVRICTRAYQLLISEAGFNPNDIIFDPNILTIGTGMEEH
CMYAINFIKATRTIKESLPGARISGGLSNLSFSFRGMEVIREAMHGVFLYHAIKDGMDMG
IVNAGNLPVYDDIDKELLLLCENIIWNRDPDATEKLLLYAQNNAKGGKKVVQTDEWRKSS
VEERLEYALIKGIEKHVVEDTEEARLQSERYPRPLHVIEGPLMNGMKTVGDLFGAGKMFL
PQVIKSARVMKKAVGHLIPFMEKERQERMSGSEEDADPYQGTVLLATVKGDVHDIGKNIV
GVVLGCNNFRVIDLGVMIPCDRILREAIQNKADVIGLSGLITPSLDEMIHVAKEMERLGL
KTPLLIGGATTSKTHTAVRIAPRYSSPVVHVLDASRSVVVCSQLLDEAVREDFFEELRDE
YEDIRQDHYDSLKDRRFLSLSRAREKGLHIDWLSQPRPVRPQFLGTRVFDSYDLRSLVDF
IDWKPFFDVWQLRGKYPNRGYPKIFKDKTVGEEARRVHDDAVKLLNRLIDSGGLHARGIL
GFWRAQSDGDDIIVYSDDDTSHIATFHGLRQQAEKDSASSEPYLCLSDFVAPRGSGVQDY
VGLFTVSVFGAEELSRTFEQQNDDYNSIMVKALADRLAEAFAEELHARVRRDWWGYSGEE
DLSTSDLHRLRYDGIRPAAGYPSQPDHTEKLTMWKLADIQEKTGIALTESLAMSPAASVS
GLYFSNPKSCYFAVGKVTREQVEDYAQRKQMTVCEVERWLGPILGYDTD
NT seq 3930 nt   +upstreamnt  +downstreamnt
atgtgcgcatgcgcatcagtacacgtgtcagtctgcgcatgcgcggccgtactacacgtg
ttgcacagaagtcttcccaaagaaagtttgcgagtgtttgccggccggcctcatcgtttt
tctcagtgtctcgggacttcattcgcctccatgccgccgacgatacaccgcggttcgaca
gccgcaggaagagcgccgtctctccgggatgaactcgagcagctcctgcatcagaggatt
ctggttctggacggtggaatgggaacgatgatccagcagaggaacctggaagaggaagat
ttcagaggtcaagagttcaaaggtcatcccaagagtctgaagggcaataatgacctgctg
agcatcactcagccggacgtcatctacagcatccacaaggagtatctggaggccggcgca
gacctcatcgagaccaacaccttcagtagcaccagcatcgctcagcaagactacggcctg
gaggatctggcgtatcggctgaataaagcgtctgctgaactggcccggagagcggctgat
gatgtcacagctcaaacaggttgtaagcggtttgtcgcaggagctttggggccaaccaat
aaaaccctgtctgtgtcgccgtcagtggagagacccgactacaggaacatcacgttcgat
gagctggtggaggcgtatgaggagcaggtgaagggtttgctggatggaggtgctgatgtt
ctgctggtggaaaccatctttgatacggctaatgcaaaggcggctttatttgcaatcgac
agactgtttgaagagagttatgaacctcgaccggtgttcatttccggcactatcgtggat
aagagcggtcgcacactctcaggtcagacgggcgaggcgttcgtcatcagcatgtctcac
gctcaaccgctgtgcatcggcctgaactgcgctctgggagccagtgagatgcggcccttc
atcgaggccatcgggaagagcacaggcgccttcgtcatctgttacccgaacgctgggctt
cccaacacattcggaggctacgacgagacgcccgaggtcacagcggggcatataaaggag
ttcgctgtggacggtttggtgaatattgttggcggctgctgcggaacgacacccgatcac
atccgggcgattgctgaaagtgtgagtcatgtaaagcccagagttcctcccacagacgtg
ttcagggattatatgcttctgtcaggtctggagccgttcaggatcggcccgtacacaaac
ttcgtgaacatcggtgagcgctgcaacgtcgccggatcgcgcaggtttgccaaactcatc
atggcgggacaatatgaggaggcgttgagcatcgctaaagcccaggtggagatgggcgct
caggttctggacatcaacatggacgaggggatgctggacggatgcgctgcgatgacccgc
ttctgcaacctgatctcctctgagcccgacatcgccaaggtgccgctgtgcatcgactcg
tcgaacttcgccgtgatcgaggcgggtctgaagtgctgtcagggcaagggcatcgtgaac
agcatcagcctgaaggagggcgaggaggagttcctgcggcgcgcccgtctggtccgtcgc
tacggcgccgcggtggtcgtcatggccttcgatgaggaaggacaggcgactgaaacagat
cagaaggtgcggatctgtacgagagcctatcagctcctgatcagtgaggcgggcttcaac
cccaatgacatcatctttgacccgaacatcctgaccatcggcaccggcatggaggagcac
tgcatgtacgccatcaacttcatcaaagccacacgcaccatcaaggagagtctgccgggc
gcgaggatcagcggtggcctctccaacctctcgttctccttcagagggatggaggtcatc
agggaagccatgcatggagtgtttctctaccacgccatcaaggatggcatggacatgggg
atcgtgaacgctggtaatctgccggtgtatgacgacatcgataaagagctcctgctgctc
tgtgagaacatcatctggaaccgagacccagacgccacagagaagctcctgctgtacgct
cagaataacgctaaaggaggaaagaaggtggttcagacggatgagtggaggaagagcagc
gtggaggagcggctggagtacgcactcatcaagggaatagagaagcatgtggtggaggac
acggaggaggctcgtcttcagtcggagcggtatccccggccgctgcacgtgatcgagggg
ccgctcatgaacggcatgaagacggtcggagatctgttcggggccgggaagatgttctta
cctcaggtcatcaaatcggcgcgtgtgatgaagaaagcggtcgggcatctgattcccttc
atggagaaggagaggcaggagaggatgtcgggatctgaggaagacgctgacccgtatcag
gggacggttctgttggccacggtgaagggagacgttcatgatatcggcaagaacattgtg
ggagtcgtgctgggatgcaacaacttcagggtcattgatctgggagtgatgattccctgt
gacagaatcctgcgggaggccattcagaacaaagcagatgtcatcggcctctccggtctc
atcactccgtctctggatgaaatgattcacgtggccaaagaaatggagcgtctgggcctg
aagactcctctgctgatcggcggagcgaccacgtccaagactcacacagcggtgagaatc
gccccgcgctacagctcacccgtcgttcacgtgttggacgcgtcccgcagcgtagtagtg
tgctctcagctgctggatgaagctgtgcgtgaggatttcttcgaggagctccgagacgag
tatgaggacatccgacaggatcattacgactctctgaaggacagacgcttcctgtctctg
agtcgagcgcgagagaagggccttcatatagactggctctcgcagcccagaccagtgcgg
ccgcagttcttgggcacacgcgtgtttgactcgtatgacctgcgttcgctcgtggacttc
atcgactggaagcccttctttgacgtgtggcagctgaggggcaaataccccaaccgcgga
taccccaaaatattcaaggacaaaaccgtgggagaggaggctcggcgtgtccatgatgac
gctgtgaagctgctgaaccgcttgattgacagcggaggtcttcatgcccgggggattctg
ggattctggcgcgctcagagcgacggcgatgacatcatcgtgtacagtgatgacgacacg
tcacatatcgccaccttccacggcctccgacagcaggccgagaaggactccgcgagctca
gagccgtacctgtgtctgtcggacttcgtggctcctcgcggcagcggcgttcaggattac
gtgggtctgttcacagtgtccgtgttcggagcggaagagctcagccgcacgtttgagcag
cagaacgacgattacaacagcatcatggtcaaagcgctggcggaccgactcgctgaggcg
ttcgcggaagagcttcacgctcgcgtccgcagggactggtggggttacagcggagaggag
gacctgtcgacctctgacctccaccgtctgcgctacgatggcatccgcccggccgcgggg
tatcccagccaacccgaccacacagagaaactcaccatgtggaaactggccgacattcag
gagaaaaccggtatcgctctgaccgagtctctggccatgagtcccgccgcatccgtgtcc
ggcctctacttctccaaccccaaatcctgttatttcgccgtggggaaagtgactcgagag
caggtggaggactacgcgcagaggaagcagatgacggtgtgtgaggtggagcgctggttg
ggtccgatcctgggctacgacaccgactga

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