Pimephales promelas (fathead minnow): 120487315
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Entry
120487315 CDS
T08155
Symbol
cbsb
Name
(RefSeq) cystathionine beta-synthase b
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm00260
Glycine, serine and threonine metabolism
pprm00270
Cysteine and methionine metabolism
pprm00670
One carbon pool by folate
pprm01100
Metabolic pathways
pprm01230
Biosynthesis of amino acids
Module
pprm_M00035
Methionine degradation
pprm_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120487315 (cbsb)
00270 Cysteine and methionine metabolism
120487315 (cbsb)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120487315 (cbsb)
Enzymes [BR:
pprm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
120487315 (cbsb)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
120487315
NCBI-ProteinID:
XP_039539562
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MPSVPSSSESVGTGPICPHAAKVLSNAANGESGINMDAKLKVDSVLNGNAGQKLNVNGTA
HANETNSHHVKSINGELMENGSEITMERKWIRPDLPSRCTWKLGDPNTDSPHNHFQRTET
PRILPNILSKIGETPLVRMNKIPNAFGLKCEILAKCEFFNAGGSVKDRISLRMVEDAEQD
GILKPGDTIIEPTSGNTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPT
SARFDSPESHVGVAWRLKNEIPNAHILDQYRNPSNPLAHYDTTAEEILLQCDGKIDMLVA
GAGTGGTITGIARKLKEKCPDIKIVGVDPEGSILAEPEELNNTDKTQYEVEGIGYDFIPT
VLDRSVVDSWYKSNDEESFAMSRMLIREEGLLCGGSSGTAMSAAVHVAKELKEGQRCVVI
LPDSIRNYMSKFLSDKWMCEKGFLSEEDLVVKKQWWWNLTLQELRLSAPLTVLPSVSIKK
TIQILKEKAFDQAPVVDEAGQILGMVTLGNMLSSVLAGKVKPSDPISKVLYKQFKQVRLT
DNLGKLSRILETDHFALVVHEQIQYMSNGSPKMRQMVFGVVTAIDLLNYVATRERRERSL
SECSMSEEQ
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccatcagtaccatctagttcagagtcagttgggactggtcccatctgcccacatgct
gccaaggtcctctcaaatgctgcaaatggagaatctggcatcaacatggatgccaagctg
aaagtcgattccgtcttgaatggaaatgctggacaaaagttaaatgtgaacggcacagcc
catgcgaatgaaacaaacagtcaccatgtgaagagtattaatggagagctcatggagaat
ggatcggagatcaccatggagaggaaatggattcgaccagatttgcccagcagatgcact
tggaaacttggtgacccaaacaccgattcaccccacaaccacttccaacggactgagaca
cccaggatcctccctaacatcttaagcaagattggagagaccccactggtccgaatgaac
aagattcccaatgcttttggcctcaagtgtgagattttggctaaatgcgagttcttcaat
gccggtggaagcgtgaaggaccgaatcagtctgcgaatggtagaggatgctgagcaagat
ggcatccttaaacctggagacactatcattgaacccacgtcaggaaacacaggtattgga
cttgccctggcagcagcagtcaaaggttatcgctgcatcattgttatgcctgaaaagatg
agcatggaaaaggtggacgttctccgtgctctgggtgcagagattgttcgtactcctacc
tctgcccgttttgactctcctgagtctcatgtgggtgtggcttggcgtttgaagaatgag
atccctaatgctcacattctggaccagtaccgtaatcccagcaaccccctggcccactat
gacaccactgcagaggagattctgctccagtgcgatggaaaaatagacatgctggtggct
ggagctggcactggtggcaccatcactggtatcgcccgcaagctgaaggagaaatgccct
gatatcaagatagttggagtggatcctgagggctccatccttgctgagcctgaggagctg
aataacactgataagactcagtatgaggtggagggcatcggatatgacttcatccccact
gttctggacagatctgtggtggatagttggtacaagtccaatgatgaggagtcctttgcc
atgtctcgtatgctaatcagagaggagggtcttctgtgcggcggcagttcaggcacagcc
atgtctgcagcagtgcatgtggccaaagagctgaaggaaggccagcgttgtgtggtgatc
cttcctgactccatccgcaactacatgtctaaatttcttagtgacaagtggatgtgtgaa
aagggcttcctgagtgaggaggatcttgttgtcaagaagcaatggtggtggaatctgact
ctacaggagctccgactctccgcccccctgactgtgcttccttcagtgtccatcaagaag
accattcagatcctgaaagagaaggcctttgaccaagcacccgtggtggatgaggctggg
cagattctgggcatggtcacgttggggaacatgctctcgtcggttctggctgggaaggtt
aagccatctgatcccataagcaaagttctctacaaacagtttaaacaggtgcgcctaact
gataacctgggcaaactctcacgtatcctggagacggaccattttgcccttgttgtgcac
gaacagattcagtacatgagtaatggatcccccaagatgaggcagatggtgtttggggta
gtgaccgctattgacctgctgaactacgtggccacacgtgagaggagggaacgctctctg
tccgagtgctctatgtctgaagagcagtga
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