Pimephales promelas (fathead minnow): 120488561
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Entry
120488561 CDS
T08155
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120488561 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pprm03400
]
120488561 (nthl1)
Enzymes [BR:
pprm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
120488561 (nthl1)
DNA repair and recombination proteins [BR:
pprm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120488561 (nthl1)
Prokaryotic type
120488561 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
DUF2400
Motif
Other DBs
NCBI-GeneID:
120488561
NCBI-ProteinID:
XP_039541165
LinkDB
All DBs
Position
Unknown
AA seq
417 aa
AA seq
DB search
MLAPVRSLCVYMFRSLTVRMNSPYFTDSTSGLDTSSNDRMGESAVNKGGIRRLRSRMAQG
LKSEDDPPKVKAEVLEQSISLQTHAQPPTGQMNCTETVSNCKKTTIKVKEEAVDNQAIVM
SSRKTRRGSLKVEYEEEGAGLKREPCDWRTQLSFIREMRSKRNAPVDQMGAEKCYDTEAP
PEVRRYHVLISLMLSSQTKDLVTAGAMQRLREHDLSVDAILNMDEETLGKLIYPVGFWRT
KVKYIKQATALIQQEFGGDIPDTLEGLMRLPGVGPKMAHLAMDIAWNQVSGIGVDTHVHR
ISNRLGWTRKKTKTPEETRRALEEWLPRDLWSEINWLLVGFGQQVCLPVGPLCSVCLNQH
TCPAAHQSSPRKRLKSSPASPTPKVKGNLGHEEPRGNRQKGKAGAPPSGQTSVLHSA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgccagtccggagcttatgtgtgtatatgtttcgtagtttgactgtaagaatg
aactctccatatttcaccgattcaacatctgggttagacacttcttcaaatgataggatg
ggggaaagtgctgtaaataaaggaggaatccgtagattgagatccagaatggctcaaggg
ctcaaatcagaagatgatcctccaaaagtgaaagcagaagtactcgagcagagtatttca
ctgcagacgcacgcacagcctcctacaggtcagatgaactgcacagaaactgtgtcaaat
tgcaaaaagacaaccataaaagtgaaggaagaagcagtggataatcaagccattgtgatg
tcatctaggaaaacaaggcggggcagtttaaaggtggagtatgaagaggaaggggcaggg
cttaagagggaaccgtgtgattggagaacacagctgtcatttatcagggagatgaggagc
aaacggaacgctcctgtggaccaaatgggagcggaaaaatgctacgacacagaggcccca
cctgaggtgcgtcgttaccacgtgctgatctctttaatgttgtccagtcaaacgaaagat
cttgtgacggctggcgctatgcagaggttacgtgagcatgacctcagcgtggacgcaata
ctcaacatggatgaggaaactctgggcaaactcatctaccctgtgggcttctggaggaca
aaggtgaagtacatcaagcaggccacggctctgatccagcaggagtttggcggagacatt
cctgacacattggagggtctgatgcgtctgccgggcgtcggccctaagatggcccacttg
gccatggacatcgcctggaaccaggtttcaggcatcggcgtggacacccacgtccaccga
atctcaaacaggctcggatggaccaggaaaaagaccaagacaccagaggagacacggaga
gctctcgaggagtggttaccacgagatctgtggagcgagatcaactggctgctggttggt
ttcgggcagcaggtgtgtttacctgtcggcccgctgtgctccgtgtgtttgaatcagcac
acctgtcccgccgcacaccaatcctctcccaggaagaggctcaagtccagtccagcatct
ccaacaccaaaggttaaaggaaacctgggacatgaggagcccagaggaaaccgacagaag
gggaaagcaggagcgccaccatcaggacagacctctgtcttacattcagcttga
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