Pimephales promelas (fathead minnow): 120488943
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Entry
120488943 CDS
T08155
Symbol
sharpin
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K20894
shank-associated RH domain-interacting protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04217
Necroptosis
pprm04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120488943 (sharpin)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120488943 (sharpin)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120488943 (sharpin)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
120488943 (sharpin)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sharpin_PH
Zn_ribbon_RanBP
ubiquitin
PH
Ubiquitin_2
Motif
Other DBs
NCBI-GeneID:
120488943
NCBI-ProteinID:
XP_039541473
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MAVNSGCSSTVLMSVRVSVRPLSVGSDSLRLQLSMNANRAGLFTLTLRHTDRGGRSVSLA
EFDLRSVKYEITSTRCHELRLTKPPHDCLTFTFRSEQEAQEWATVMMSSLRETHRVAKML
HVSHDGLQDMKCEEKKVLSLSMKEELCIELARAIETGDTHAAVHYASDLARQQIALTIQP
ALRDAEDREISLAVVVEDASSSCCVTVKVHPQVTVASLKQQMFAEYGFYPRVQRWVIAQC
LCSDDRSLASYGIYRDGDTAFLYLLSARHACLDHQQDQENGLPMPTVAPPLNAALAHTPA
ISQDWRGYSTLPPRFSHSSTGSSGCGPEKHSVSDIINLEMLQLGRSKLKSSNTQPGWSCP
SCTFINKSTRPGCEICSTDRPNPPNISSVQQEKARRSNQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggccgttaactcgggctgcagtagcaccgtgttgatgtcggtgcgggtgtcggttcgg
ccactcagtgtgggctcggattcactgcggctgcagctcagcatgaacgcgaaccgcgcg
ggactcttcacgctcacgctcagacacaccgaccgcggaggacgcagcgtgtctctagca
gagtttgatctacgctcagtgaagtacgagatcacgtcgactcgatgtcacgaactgcgt
ctcaccaagccgccccacgactgcctcacgtttaccttccgcagcgaacaggaggcccag
gaatgggcaactgtcatgatgtcatcactgagagagacacatagagttgccaaaatgttg
catgtctcacatgatggactgcaggatatgaagtgtgaagagaaaaaagtcttgtcgctg
tcaatgaaagaggagctgtgtatagagcttgctcgagcaatagagaccggagacactcac
gcagctgtgcactacgcctcggatctggcccggcagcagatcgcactgactattcaacca
gcgctgcgggacgctgaggacagagagataagcttagctgtggtcgtagaagatgcatca
tcttcctgttgtgtcacagtaaaagtccacccgcaggtgactgtcgcttctctgaagcag
cagatgtttgctgagtatggtttttaccccagggtgcagcgctgggtgatcgctcagtgt
ctgtgctccgatgaccgttctttagcgtcgtacggcatctacagggacggtgacacagca
tttctatacctcttgtctgcccgtcacgcctgcctcgatcaccagcaggaccaggagaac
ggcctcccgatgccgactgtagcgccaccactaaacgccgcgctggcccacacgccggcc
atcagtcaagactggagaggctacagcacgttaccgccccgcttcagccacagcagcaca
ggcagcagtgggtgtggcccagagaaacatagcgtcagtgacatcattaaccttgagatg
ttgcaacttggacgctccaaactgaaatcaagtaacacacagccaggctggtcctgccct
tcctgtacattcataaataagtctacgcgacccggctgtgaaatctgcagcacagatcgg
ccaaaccctcccaatatcagtagcgttcaacaggaaaaagcaagaagatctaaccagtga
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