Pimephales promelas (fathead minnow): 120489183
Help
Entry
120489183 CDS
T08155
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03272
Virion - Hepatitis viruses
pprm04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120489183
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120489183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120489183
Membrane trafficking [BR:
pprm04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
120489183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Vgb_lyase
hEGF
Motif
Other DBs
NCBI-GeneID:
120489183
NCBI-ProteinID:
XP_039541795
LinkDB
All DBs
Position
Unknown
AA seq
870 aa
AA seq
DB search
MGISLMLLLTVTFFCPVHTGVLTCDPRQYKCGNGKCITSRWVCDEADDCGDGTDELPAAC
SMRTCRPSEFSCGGRLNQCVPKTWKCDGKADCENSADEEGCAPRRCLDGEFRCGNDQCVT
TAFVCDGEIDCDDGSDEVSCKPTTCSVNSFRCNNAQCVPRLWVCDGDADCADGSDELPQK
CSPGTPKPTKNPCSSMEFHCGSGECIHSSWKCDGGDDCLDHSDEKNCSLPTCRPDEFQCG
DGSCIHGSLQCNHINDCKDLSDELGCVNATHCDPPHRFKCRSGECIGMEKVCNNKRDCRD
WSDEPLRECDSNECLYNNGGCSHICNDLKIGYECLCPTGFQLMNKRRCEDIDECANPDTC
SQICVNQIGSYKCECEDGYQVDPASKACKAIGTIAYLFFTNRHEIRKMTLDRSEYARVIP
RLKNVVALDMNIASREIYWSDLSLKKLYRAPMDTADNSSQHSVVIDSGLYAPEGIAVDWI
HGNIYWTDSIKGAISVATSDGSRRKTLFKNNLAKPRAIVVDPIQNFMYWTDWGTSAKIER
GGLNGGDRSALVTDNIVWPNGITLDLLNQRLYWVDSKLHTLSSISVQGGGRRTLIFDQGK
LAHPLGLTVFEEKVFWTDVSNNAILSANRVTGGDITKVAEHLSSPEDIVLYHNLKQPTGI
NWCKVNNGQCEFLCLAAPQINRFSPKYTCACPDNMMLAEDMRKCIPAVVTPASPVRPEIV
TTSHTQVPSKMTPKSADPSTTNAQPSTTPAPVTPNRPTQAAPFKPSQTTTILPLSTQTDD
NYGNVKAVSDPSSSTPWALYIVVPLAILCLVVGGAVLFWRKWRQKNTNSIHFDNPVYQKT
TEDQVHLCRNRSSDGYIYPQRQTVNLDDEI
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggggatctcattaatgcttttactgacagttacattcttctgtcctgttcatacaggt
gtcttgacttgtgatccacggcagtacaagtgtggcaatggaaagtgcatcacatccaga
tgggtttgtgatgaagctgacgactgtggagacggcactgatgaacttcctgctgcctgc
tcaatgaggacatgcagacccagtgaattcagttgtggtgggcgactaaaccagtgcgtg
cccaagacttggaagtgtgacggcaaagcggactgtgagaatagtgcggatgaggaaggc
tgtgctcctcggcggtgtctggacggcgaattcaggtgcggcaatgaccagtgtgtgacg
actgcgtttgtatgtgacggtgagatagactgtgacgacggcagtgatgaagtctcctgt
aagcccaccacgtgtagcgtcaactccttcaggtgcaacaatgcacagtgcgtgcctcga
ttgtgggtctgcgacggagatgccgactgtgctgatggctctgacgaactgcctcagaaa
tgcagcccagggactcctaaacctaccaaaaatccatgctcctctatggaatttcattgc
ggcagtggggaatgcatacacagtagctggaaatgcgatgggggagatgactgcttggat
cactcagatgagaaaaactgctccttgcccacatgccgaccggatgagttccaatgtggc
gacggatcttgcatccacggcagtctgcagtgcaaccacataaatgactgcaaagatttg
agtgatgagctgggctgtgttaatgcaacccattgtgatcctccgcacaggtttaagtgc
cgcagcggtgaatgcatcggcatggaaaaagtttgcaacaataaacgagactgtagagat
tggtccgatgagccattgcgagaatgcgattctaacgagtgtctttacaacaacggtggt
tgctctcatatctgtaatgacctgaagattggttatgagtgtctgtgtcccactggcttc
caattgatgaacaagaggcggtgcgaagacatcgatgagtgtgccaacccagacacctgc
agccaaatctgtgtcaaccagattggtagttacaagtgtgagtgtgaagatggctaccag
gtggacccagccagcaaggcctgcaaagctattggaaccatcgcctacctatttttcact
aatcggcatgagataaggaagatgaccctggatcgtagcgagtatgcacgtgttattcca
cggctgaagaacgttgtggcgcttgatatgaatatcgcttccagggagatctactggtct
gatttatccctcaaaaagttatacagagcaccaatggatactgcagataactcctcccaa
cacagcgttgtgatcgacagtggcttatatgcacctgaaggtattgctgtcgactggatc
catggaaacatctactggacggatagtatcaaaggtgccatatctgtggcaacttcggat
ggaagcagacgcaagactctcttcaaaaacaacctggctaagccgcgtgctatagtggtc
gaccctatccagaacttcatgtactggactgattggggcacatcagccaagatcgagaga
ggtggtcttaatggaggggaccgcagtgccctagttacagataacattgtctggcccaac
ggaataactcttgaccttttgaaccagcgtctgtattgggttgattccaagcttcatact
ctctccagcatcagtgtacagggaggcggtcggcgtacactaatctttgaccaaggcaaa
cttgctcacccactgggtctcactgtttttgaggagaaagtgttttggacggatgtgagc
aataacgcaattctaagtgcaaatcgtgtgactggaggagacatcacaaaagtggccgaa
cacctctcatctccagaggacattgtcctgtaccacaacctcaaacagcccactggaatc
aactggtgcaaggtcaacaacggtcaatgcgagttcctctgccttgctgcccctcaaatc
aatagattctcacccaagtacacatgtgcctgcccagacaacatgatgttggccgaagac
atgagaaaatgtattccagctgttgtcacaccagcgtctcctgtcaggcctgaaatagtt
acaactagtcatactcaagttccttcaaagatgacaccaaaatctgctgacccttccact
accaatgcgcaaccttcaaccactcctgctcctgtgacccctaaccgacccactcaagct
gccccattcaagccttcccaaaccacaactatacttcctttatccacccagacagatgac
aactatggtaatgttaaagctgtctccgatccatcatcttccacaccgtgggccttatac
attgtggttcctcttgcaatcctgtgtttggttgtgggtggcgctgtgctgttttggaga
aagtggcgtcagaaaaataccaacagcatccactttgacaacccggtttatcaaaagacc
actgaggaccaggtgcacttatgcagaaaccgtagttctgatggctatatttacccgcag
agacagactgtgaatcttgatgatgaaatatga
DBGET
integrated database retrieval system
