Pimephales promelas (fathead minnow): 120489448
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Entry
120489448 CDS
T08155
Symbol
scn4ab
Name
(RefSeq) sodium channel protein type 4 subunit alpha B
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pprm04040
]
120489448 (scn4ab)
Ion channels [BR:
pprm04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120489448 (scn4ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
120489448
NCBI-ProteinID:
XP_039542198
LinkDB
All DBs
Position
Unknown
AA seq
1831 aa
AA seq
DB search
MNKRKINLSEFWSRNRAPQPIRAKKKLKLWPRQLEQLRDPEVVAALLQQNVKMACLLPHS
GIDAFRPFTLESLAEIERRMAEEAAEQEHMKAQNIEVAEEDLPKPSSDLEAGKSLPFIYG
DPPPKLLNVPIEELDPFYKAQKTFIVITKGKTIFRFNAEPACYILSPFNPIRQLAIKILI
HSLFSLFIMLTILSNCAFMTMSDPPSWSKTVEYVFTGIYTFEALIKVLSRGFCKGNFTFL
RDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK
LADVMILTVFCLSVFALIGLQLFMGNLRQKCVKWPPLVWSYSDNLTMPFNHTDVNGTEAG
FFNYTEYIEQPENHYYVPGHMDPLICGNSSDAGKCPDGFMCLKAGRNPNYGYTSYDNFAW
AFLSLFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILAVVAMAYAEQN
EATFAEAKEKEEEYAKILEQLKKQAEQKNGLVNGSKTSLSSKNKGDDDQIQSDYDGIALK
PLSKSDGSKGSMNYLEVPDSQMRKLSAANATDNALDELEDNQRACPPCWYKFADIFLKWN
CCLPWVKFKKIVYLFVMDPFVDLGITICIVLNTVFMAMEHYPMTESFENTLSVGNLVFTG
IFAAEMVLKLIALDPYYYFQVGWNIFDSIIVTMSLVELFLADVEGLSVLRSFRLMRVFKL
AKSWPTLNMLIRIIGDSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDCVCKISEDCVL
PRWHMTDFFHSFLIIFRILCGEWIETMWDCMEVADQGMCIIVFMMVMVIGNLVVLNLFLA
LLLSSFSGDNLSASDDDGEMNNLQIAISRITRGIDWVKAFIIGHTRQLLGLMPKEEGADA
NKEGDSTMATMNSSMSVIKVPMANGESDDEDGNSSSEDEDKEGVDKKKYGDESSTCSTVD
KPPEVEELEVEDEEDSTFPEDCYTENCIRRCPILELDITQGKGKAWWNLRKACYAIVEHS
YFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVIEMLLKWIAYGFKV
YFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVN
ALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYYCYNETSETVFHTSEVNNKTDCFR
LMENASDVRWKNLKVTFDNVGMGYLSLLQVATFKGWMDIMYSAVDSRNVEDQPEYESNLY
MYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKYYNAMKKLGSKK
PQKPIPRPTNCFQGLVFDLVTKQFFDIFIMVMICLNMVTMMVETDDQSAEMENILFLINC
VFIVLFTGECILKIIALRYHYFSVGWNIFDFVVVILSIAGLLLADLIEKYFVSPTLFRVI
RLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKE
GGIDDMFNFETFGNSIICLFMITTSAGWDGLLSPILNSPPNCDPNVENPGSPIQGNCGSP
AVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESGDPLCEDDFEMFYETWEKFDPSA
SQFIDYSRLSEFCDTLKDPLRIPKPNTLKLITMDLPMVPGDKIHCLDILLALTTEVLGDS
GQMDAMKGTMEEKFMANNPSKVSYEPITSTLRRKQEEVSAATIQKAYRSHILKRCLKQAS
YVYREKTDSKRLEEEAPEIEGMIANKIRYLYGDQAIEDTNRLGFSFSHHGETQHGAKRPP
VKVQSDVVLHSAPFPAPDSSRAAENLKESIV
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcggaagataaacctgtcggagttttggagtaggaaccgtgctcctcaacca
atcagagctaagaagaagctaaaactatggcctcgtcaactggaacaattgagagacccc
gaagtggtggcagccctccttcagcagaatgtcaagatggcatgcctactccctcacagt
ggcatcgatgcgttccgccccttcactttggagtcgctcgccgagatcgagcggcggatg
gcagaagaagccgccgagcaggaacacatgaaggcccagaatatcgaggtggctgaagaa
gatctgcccaaacccagcagtgatttggaagcaggaaagtccctaccgttcatctacgga
gaccctccaccaaagctcctcaatgttcctattgaagagttggatccattctacaaagca
caaaaaactttcatcgtgatcaccaaagggaaaacaatattcagattcaatgctgaacct
gcctgctacattctaagtcccttcaaccctattcgacaactagccataaaaatactcata
cattcattgttcagcttgttcatcatgttaaccatcttgtcaaactgtgctttcatgaca
atgagtgaccctccatcctggagcaaaacagtagagtacgttttcactggcatctatacc
tttgaggcattgataaaggtgctgtccagaggcttctgcaagggtaatttcacattccta
cgagacccgtggaattggctggatttcatggtcatcagcatggcgtacgtcacagagttt
gtagacttggggaatgtatccgctctgaggactttccgtgttctccgcgccctgaaaaca
attactgtaattccaggtctaaaaaccattgttggcgccctgattcagtcggtgaagaaa
ctggcggatgtcatgatcctcaccgtcttctgtctcagcgtgtttgctctcattggcctg
caactcttcatgggaaatttgcggcaaaaatgtgtcaaatggcctccacttgtctggagc
tacagtgacaacctgaccatgcccttcaatcacacagacgtcaatggcactgaagctggc
tttttcaactacacggaatatattgaacaaccagaaaaccactactatgtacctggccat
atggatcctttaatctgtgggaacagctctgatgcagggaagtgccctgatgggttcatg
tgcctgaaagctggccgaaacccaaattatggctacactagttatgacaactttgcatgg
gctttcttatcccttttccggctaatgactcaagacttctgggagaacttgttccagttg
acgctccgtgcagcagggaagacgtatatgatcttctttgtagtcatcatcttcttgggt
tcgttctacctcatcaatctgattctggctgtggtggcaatggcatatgctgaacagaat
gaagccacctttgcagaagctaaagaaaaggaggaagagtatgcaaaaatcctggagcag
ctcaagaaacaagctgagcagaagaacgggctggtaaatggcagcaagacatccctatcc
agcaaaaataaaggtgatgatgaccaaattcagagcgactatgatgggatcgcactgaaa
cccctttcgaaatcggatggatccaaaggcagcatgaattacttagaagtccctgactct
cagatgagaaaattgagtgcagcgaatgctacagacaatgctttagatgagctggaagat
aatcaaagggcttgtcctccctgctggtacaagtttgctgatatattcctgaaatggaat
tgctgccttccatgggtgaaatttaagaagattgtctacctatttgtaatggaccctttt
gtggatctgggcatcaccatctgcattgtgctcaacacagtgttcatggctatggagcac
tatcccatgactgagagttttgaaaacacattgtcggtgggaaacctggttttcacaggt
atcttcgcagcagagatggtgctaaaacttattgcactggacccttattattactttcag
gttggctggaacatttttgacagcataattgtgaccatgagcctggtggagttgttctta
gccgatgttgagggcttgtctgtgctaaggtccttccgtctgatgcgtgtgttcaagctg
gcaaagtcttggccaacccttaacatgctgataaggatcatcggcgattctgtgggtgct
cttggaaacctgacccttgtcctggccattattgtcttcatctttgctgtggtggggatg
cagcttttcggaaagagctacagggactgtgtgtgtaagatctcagaggattgtgtgctc
cctcgctggcacatgacagatttctttcactcattcctcatcatctttcgtattctatgc
ggggaatggatcgaaacaatgtgggactgcatggaggtggctgaccaaggcatgtgcatc
atcgtcttcatgatggtcatggttataggaaacctagtggtgttgaatctcttcctggct
ctgctgctcagttccttcagtggggacaacctgtcagcatctgatgatgatggggagatg
aacaatctgcagattgccatttctagaataacaagagggattgactgggtaaaggccttc
attatcggacatacaagacagcttctgggcctgatgccaaaggaagagggtgcggacgca
aacaaagagggagattctacaatggccaccatgaattccagtatgtccgttatcaaagtg
cctatggccaatggtgaatcggatgatgaggatggcaacagctcttctgaggatgaagac
aaagaaggcgtcgataaaaagaaatatggagatgaatcatcaacctgcagcacagtggac
aaacctcctgaggtagaagagttagaggtggaggatgaagaggattccaccttccctgag
gactgctacacagagaactgcatcaggcgatgtcctatcttggagcttgacattacccag
ggtaaagggaaggcatggtggaacttacgtaaagcctgctacgccattgtggagcacagc
tattttgaaaccttcatcatcttcatgattctcctcagcagtggagctttggcatttgag
gacatatacattgaacaacggagaatgattaaaatcatccttgaatatgcagatcaggtc
ttcacctatgtgtttgtcattgagatgcttctgaaatggatagcctatggtttcaaggtc
tatttcacaaacgcatggtgttggctggactttctgatcgttgatgtgtccctgatcagc
ttaactgcaaatatcttaggctactctgaactgggggccattaagtctctcaggactttg
agagcgctaagacctctccgagctctctccagatttgaaggaatgagggtggtggtgaat
gccctggtgggggccatcccctccatcttcaacgttctcctggtgtgcctaattttttgg
ctcatcttcagcatcatgggcgtcaacctttttgctggaaagttctactactgctacaac
gaaacatccgagacagttttccataccagtgaggtcaacaataagacagattgctttagg
ctcatggaaaatgcatcagatgtgcgatggaagaatttgaaggtcacctttgataacgta
ggcatgggctacctctccttactgcaagtggcaacatttaaaggatggatggacatcatg
tatagtgctgtggattcccgtaacgtggaggatcagccagaatatgagtcaaatctctac
atgtacatttactttgtgatcttcatcatttttggctctttcttcaccctcaatctattc
attggtgtcatcattgacaatttcaaccaacaaaaggcaaagttaggaggaacagacatc
ttcatgacagaagagcagaaaaaatactataatgccatgaagaaacttggctccaaaaag
ccacagaaaccaattccaaggcctacgaactgcttccaaggcttggtattcgacctggtc
accaagcaattctttgacatcttcattatggtgatgatctgcctgaacatggtgaccatg
atggtagagacggatgaccagagtgcggagatggaaaatatcctgttcttgatcaactgt
gtcttcatcgtgctcttcactggggagtgcattctcaagatcatcgccctgcgctatcac
tacttctccgttgggtggaacatttttgattttgtggtggtcattctttcaatcgcaggt
cttttgctggcagacctcatcgagaagtactttgtgtcacctacgctgttccgagtcatc
cgactggccagaatcggccgcgtcctgcgtctcatccggggtgcgaaaggaatcaggacg
ttactgtttgcgctgatgatgtcactacctgccctcttcaacattggcctccttctattc
ctaatcatgttcattttctctatattcggcatgtctaactttgcgtacgtgaaaaaagaa
ggaggcatcgatgacatgtttaatttcgagaccttcgggaacagcatcatatgcttgttc
atgatcacgacgtccgccggctgggatggactgttgtctcctattctcaacagtccacca
aactgtgacccaaatgtggagaacccaggatcgcctatccaaggaaactgtgggagccct
gcggtgggcatcgtcttcttctgcagctacattgtcatgtcgttcctcgtcgtggtcaac
atgtacatagccattatcctggaaaacttcaacgtagcgacggaagaaagtggcgacccc
ttgtgcgaggacgacttcgagatgttctatgaaacctgggagaaatttgacccctctgct
tctcagttcatcgattacagtagactgtctgaattctgcgacacgctgaaagaccccttg
agaatcccgaaaccaaacacattgaagttgatcacaatggaccttcccatggtccctggt
gataagatccactgtctggacatcctcctggccctcaccacagaggtcctgggcgattct
ggacagatggatgccatgaaaggaactatggaggagaagttcatggcgaacaacccctca
aaggtttcgtacgagcccatcaccagcactctcagacgtaagcaagaagaagtgtccgct
gcgaccatccaaaaagcctaccgctcacacatcctcaaacgctgcctcaaacaagcctcg
tatgtgtacagagagaagacagactcgaagagactagaagaagaggctccggagatcgaa
gggatgatcgctaacaagattaggtatctttatggagatcaagccattgaggacaccaat
cgtctgggtttctctttctctcaccatggggaaacacagcacggggctaagcgtcctccg
gtgaaggttcagagcgacgtagtcttgcactccgcgccttttcccgctcctgactcctca
agggctgcggaaaacctgaaggagtcaattgtgtag
DBGET
integrated database retrieval system
