KEGG   Pimephales promelas (fathead minnow): 120489992
Entry
120489992         CDS       T08155                                 
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
  KO
K04359  platelet-derived growth factor subunit A
Organism
pprm  Pimephales promelas (fathead minnow)
Pathway
pprm04010  MAPK signaling pathway
pprm04020  Calcium signaling pathway
pprm04510  Focal adhesion
pprm04518  Integrin signaling
pprm04540  Gap junction
pprm04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:pprm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    120489992 (pdgfbb)
   04020 Calcium signaling pathway
    120489992 (pdgfbb)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    120489992 (pdgfbb)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120489992 (pdgfbb)
   04540 Gap junction
    120489992 (pdgfbb)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    120489992 (pdgfbb)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:pprm04052]
    120489992 (pdgfbb)
   00536 Glycosaminoglycan binding proteins [BR:pprm00536]
    120489992 (pdgfbb)
Cytokines and neuropeptides [BR:pprm04052]
 Cytokines
  Growth factors (RTK binding)
   120489992 (pdgfbb)
Glycosaminoglycan binding proteins [BR:pprm00536]
 Heparan sulfate / Heparin
  Growth factors/receptors
   120489992 (pdgfbb)
SSDB
Motif
Pfam: PDGF PDGF_N
Other DBs
NCBI-GeneID: 120489992
NCBI-ProteinID: XP_039543220
LinkDB
Position
Unknown
AA seq 489 aa
MRSRIPLLLAVLAAACLRFGSAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEPD
SHHENDTSNRLPRSLLDAQPAQQAICKVRTEVIEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKSLQCVPVLTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVECRCQPAPRPAQRRK
SSGQKQDARERLGKTRPKDELHRSDELKHNQRLSLEDLLSHSWLPKERFSESGASDTFHF
GRDGWARNETQYGGGKSNHRHPADGRRHGNTNGTSSAQGTTAPLPNHTEQEETDSSQHNT
TQFESQRHANQSTTNQTSEYNMGPLELTNQTFNHQSNLTQEIEQLRTTNQTEQLAFSATG
TASQNLGDVKENGPNVRGETTDVEAKEVEREQRQMDRKAKEEEHKLLDEQKHKHHLKVQQ
TNIQPDEKLQQLHHKQQHTHTTTQRTGTISPPLQHLPPHKPHRPPPHPPKRRRKQRNRIS
KSAMRALLM
NT seq 1470 nt   +upstreamnt  +downstreamnt
atgagatcgcggatcccgctacttctcgcggtacttgcggcggcgtgtctgcggtttggc
agtgcggaggccgatcctctcccggctgctgtggttgagttggtgaagggtggatctgtg
tcttctattcaggacttgcagtttctactgttttctgaatccatagaggttgagccagac
agtcaccatgaaaacgacaccagcaaccgtctgccacgcagtcttctggatgctcagccc
gctcagcaagccatctgtaaggtcaggaccgaggtcatcgaggtcacacgctccatgttg
gaccgtagcaatgcaaatttcctgttgtggcctccgtgcgtggaggtgcagagatgctcg
ggctgctgtaacaccaagagcctgcaatgtgttcctgtacttacacacacacgataccta
caggtgatgaagatacagtacgtgaacaagcggccgctctacgataaggccgtcgtctcc
gtcctcgaccatgtagagtgccgctgtcagccggctcctcggcctgcccagcgccggaaa
tcatccggccaaaaacaggacgcacgggaacgtttgggaaaaactcgacccaaagacgag
ctccatcgcagtgatgaactcaaacataaccagaggttaagcctggaggacctgctaagc
cacagttggctccctaaagagagattctctgaatcaggagcatcagacactttccatttc
ggccgtgacggctgggctcggaacgagacgcagtacggagggggtaaaagtaatcaccgt
caccctgcggacggaaggagacacggcaacacgaacggcacatcatcagcacagggaaca
acggctccactgcccaatcataccgagcaggaagaaactgattcgtcacagcacaacact
acgcaatttgaatcacagcgtcatgccaaccaaagtacaaccaatcagacatctgaatat
aacatggggccattagaattaaccaatcagacttttaatcaccagtcaaacctcacgcaa
gaaatagaacaattgcgaacaaccaatcagacagaacaacttgctttcagtgccacagga
acagccagtcagaatttgggagatgtaaaggagaatggtccgaatgtgagaggtgagacg
acagacgtagaggcgaaggaggtggagcgagagcagagacaaatggacagaaaggccaag
gaggaggagcacaaactcctagatgagcagaaacataaacatcacctcaaagtacagcag
acgaatatacagccggacgagaaactacagcaactgcatcataaacaacaacacactcat
acaactacacagcggacaggaaccatatcccctcctctgcaacatctccctccacacaaa
cctcacaggccacctcctcaccccccgaaaaggaggagaaagcaacgtaatcgtatcagc
aaatctgccatgagagctcttctcatgtaa

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