Pimephales promelas (fathead minnow): 120489992
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Entry
120489992 CDS
T08155
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
KO
K04359
platelet-derived growth factor subunit A
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
pprm04510
Focal adhesion
pprm04518
Integrin signaling
pprm04540
Gap junction
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120489992 (pdgfbb)
04020 Calcium signaling pathway
120489992 (pdgfbb)
09133 Signaling molecules and interaction
04518 Integrin signaling
120489992 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120489992 (pdgfbb)
04540 Gap junction
120489992 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120489992 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprm04052
]
120489992 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120489992 (pdgfbb)
Cytokines and neuropeptides [BR:
pprm04052
]
Cytokines
Growth factors (RTK binding)
120489992 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120489992 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
120489992
NCBI-ProteinID:
XP_039543220
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MRSRIPLLLAVLAAACLRFGSAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEPD
SHHENDTSNRLPRSLLDAQPAQQAICKVRTEVIEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKSLQCVPVLTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVECRCQPAPRPAQRRK
SSGQKQDARERLGKTRPKDELHRSDELKHNQRLSLEDLLSHSWLPKERFSESGASDTFHF
GRDGWARNETQYGGGKSNHRHPADGRRHGNTNGTSSAQGTTAPLPNHTEQEETDSSQHNT
TQFESQRHANQSTTNQTSEYNMGPLELTNQTFNHQSNLTQEIEQLRTTNQTEQLAFSATG
TASQNLGDVKENGPNVRGETTDVEAKEVEREQRQMDRKAKEEEHKLLDEQKHKHHLKVQQ
TNIQPDEKLQQLHHKQQHTHTTTQRTGTISPPLQHLPPHKPHRPPPHPPKRRRKQRNRIS
KSAMRALLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgcggatcccgctacttctcgcggtacttgcggcggcgtgtctgcggtttggc
agtgcggaggccgatcctctcccggctgctgtggttgagttggtgaagggtggatctgtg
tcttctattcaggacttgcagtttctactgttttctgaatccatagaggttgagccagac
agtcaccatgaaaacgacaccagcaaccgtctgccacgcagtcttctggatgctcagccc
gctcagcaagccatctgtaaggtcaggaccgaggtcatcgaggtcacacgctccatgttg
gaccgtagcaatgcaaatttcctgttgtggcctccgtgcgtggaggtgcagagatgctcg
ggctgctgtaacaccaagagcctgcaatgtgttcctgtacttacacacacacgataccta
caggtgatgaagatacagtacgtgaacaagcggccgctctacgataaggccgtcgtctcc
gtcctcgaccatgtagagtgccgctgtcagccggctcctcggcctgcccagcgccggaaa
tcatccggccaaaaacaggacgcacgggaacgtttgggaaaaactcgacccaaagacgag
ctccatcgcagtgatgaactcaaacataaccagaggttaagcctggaggacctgctaagc
cacagttggctccctaaagagagattctctgaatcaggagcatcagacactttccatttc
ggccgtgacggctgggctcggaacgagacgcagtacggagggggtaaaagtaatcaccgt
caccctgcggacggaaggagacacggcaacacgaacggcacatcatcagcacagggaaca
acggctccactgcccaatcataccgagcaggaagaaactgattcgtcacagcacaacact
acgcaatttgaatcacagcgtcatgccaaccaaagtacaaccaatcagacatctgaatat
aacatggggccattagaattaaccaatcagacttttaatcaccagtcaaacctcacgcaa
gaaatagaacaattgcgaacaaccaatcagacagaacaacttgctttcagtgccacagga
acagccagtcagaatttgggagatgtaaaggagaatggtccgaatgtgagaggtgagacg
acagacgtagaggcgaaggaggtggagcgagagcagagacaaatggacagaaaggccaag
gaggaggagcacaaactcctagatgagcagaaacataaacatcacctcaaagtacagcag
acgaatatacagccggacgagaaactacagcaactgcatcataaacaacaacacactcat
acaactacacagcggacaggaaccatatcccctcctctgcaacatctccctccacacaaa
cctcacaggccacctcctcaccccccgaaaaggaggagaaagcaacgtaatcgtatcagc
aaatctgccatgagagctcttctcatgtaa
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