Pimephales promelas (fathead minnow): 120489992
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Entry
120489992 CDS
T08155
Symbol
pdgfbb
Name
(RefSeq) uncharacterized protein pdgfbb
KO
K04359
platelet-derived growth factor subunit A
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04010
MAPK signaling pathway
pprm04020
Calcium signaling pathway
pprm04510
Focal adhesion
pprm04540
Gap junction
pprm04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120489992 (pdgfbb)
04020 Calcium signaling pathway
120489992 (pdgfbb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120489992 (pdgfbb)
04540 Gap junction
120489992 (pdgfbb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120489992 (pdgfbb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
pprm04052
]
120489992 (pdgfbb)
00536 Glycosaminoglycan binding proteins [BR:
pprm00536
]
120489992 (pdgfbb)
Cytokines and neuropeptides [BR:
pprm04052
]
Cytokines
Growth factors (RTK binding)
120489992 (pdgfbb)
Glycosaminoglycan binding proteins [BR:
pprm00536
]
Heparan sulfate / Heparin
Growth factors/receptors
120489992 (pdgfbb)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
120489992
NCBI-ProteinID:
XP_039543220
LinkDB
All DBs
Position
Unknown
AA seq
489 aa
AA seq
DB search
MRSRIPLLLAVLAAACLRFGSAEADPLPAAVVELVKGGSVSSIQDLQFLLFSESIEVEPD
SHHENDTSNRLPRSLLDAQPAQQAICKVRTEVIEVTRSMLDRSNANFLLWPPCVEVQRCS
GCCNTKSLQCVPVLTHTRYLQVMKIQYVNKRPLYDKAVVSVLDHVECRCQPAPRPAQRRK
SSGQKQDARERLGKTRPKDELHRSDELKHNQRLSLEDLLSHSWLPKERFSESGASDTFHF
GRDGWARNETQYGGGKSNHRHPADGRRHGNTNGTSSAQGTTAPLPNHTEQEETDSSQHNT
TQFESQRHANQSTTNQTSEYNMGPLELTNQTFNHQSNLTQEIEQLRTTNQTEQLAFSATG
TASQNLGDVKENGPNVRGETTDVEAKEVEREQRQMDRKAKEEEHKLLDEQKHKHHLKVQQ
TNIQPDEKLQQLHHKQQHTHTTTQRTGTISPPLQHLPPHKPHRPPPHPPKRRRKQRNRIS
KSAMRALLM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagatcgcggatcccgctacttctcgcggtacttgcggcggcgtgtctgcggtttggc
agtgcggaggccgatcctctcccggctgctgtggttgagttggtgaagggtggatctgtg
tcttctattcaggacttgcagtttctactgttttctgaatccatagaggttgagccagac
agtcaccatgaaaacgacaccagcaaccgtctgccacgcagtcttctggatgctcagccc
gctcagcaagccatctgtaaggtcaggaccgaggtcatcgaggtcacacgctccatgttg
gaccgtagcaatgcaaatttcctgttgtggcctccgtgcgtggaggtgcagagatgctcg
ggctgctgtaacaccaagagcctgcaatgtgttcctgtacttacacacacacgataccta
caggtgatgaagatacagtacgtgaacaagcggccgctctacgataaggccgtcgtctcc
gtcctcgaccatgtagagtgccgctgtcagccggctcctcggcctgcccagcgccggaaa
tcatccggccaaaaacaggacgcacgggaacgtttgggaaaaactcgacccaaagacgag
ctccatcgcagtgatgaactcaaacataaccagaggttaagcctggaggacctgctaagc
cacagttggctccctaaagagagattctctgaatcaggagcatcagacactttccatttc
ggccgtgacggctgggctcggaacgagacgcagtacggagggggtaaaagtaatcaccgt
caccctgcggacggaaggagacacggcaacacgaacggcacatcatcagcacagggaaca
acggctccactgcccaatcataccgagcaggaagaaactgattcgtcacagcacaacact
acgcaatttgaatcacagcgtcatgccaaccaaagtacaaccaatcagacatctgaatat
aacatggggccattagaattaaccaatcagacttttaatcaccagtcaaacctcacgcaa
gaaatagaacaattgcgaacaaccaatcagacagaacaacttgctttcagtgccacagga
acagccagtcagaatttgggagatgtaaaggagaatggtccgaatgtgagaggtgagacg
acagacgtagaggcgaaggaggtggagcgagagcagagacaaatggacagaaaggccaag
gaggaggagcacaaactcctagatgagcagaaacataaacatcacctcaaagtacagcag
acgaatatacagccggacgagaaactacagcaactgcatcataaacaacaacacactcat
acaactacacagcggacaggaaccatatcccctcctctgcaacatctccctccacacaaa
cctcacaggccacctcctcaccccccgaaaaggaggagaaagcaacgtaatcgtatcagc
aaatctgccatgagagctcttctcatgtaa
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