Pimephales promelas (fathead minnow): 120490027
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Entry
120490027 CDS
T08155
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a isoform X1
KO
K16798
zinc finger protein GLI2
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120490027 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120490027 (gli2a)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120490027 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
120490027
NCBI-ProteinID:
XP_039543296
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
METTSPSTTEKKECKVSGLDGSSFSDLPKKPSPTTASRAPHLFSTFHTPIPIDMRHHEGR
YHYEPHPLHSMHGPHGLAGSPVISDISLIRLSPHAATTGESPFNPPHPYVNPHMEHYLRS
VHSSPTLSMISAARGLSPADAVTHEHLKERSLFGLPPPPPGANPSDYYHLITSHRSPYGD
LLMQTGAAATHLPDYMSPVDMSRFPSPRLTPRVSSRKRALSISPVSDASIDLQTMIRTSP
NSLVAYINNSRSSSAASSSYGHLSVGAISPSFTFPHPITPVAYHQLLSQQRSLNAFGHTP
PLLQPSPSLSSRQQTLVAAAALTNNSADTNTESSQNAGGDPAVSSTVNPMIFKRSKVKTE
TDGPHPISPGSQDHMELREELDKDECKQEPEAVYETNCHWEGCSKEYDTQDQLVHHINND
HIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLK
THLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSL
RKHVKTVHGPDAHVTKKQRGDVPPKPHPPKGNGENEAHTKHARERSDGLGEANSTTRGVE
DCQHVKSIKTENTMMYQSSPGGQSSCSSEPSPLGSATNNDSGVEMAMHSGGSLGDLNALD
DSPVVDSTGSPGSSAGVGLQLRKNRGGLLNVDHIKKEKLKMVRDSCSWANASPQVRNTKL
PPIPTIDSLLETSNMGTQMPGPPTQRSGDLSSYEMTVLNQLHERRDSSTSTMSSAYTLSR
RSSGISPCYSSRRSSETSQFGVRNNNVSSADSYDPISTDMSRRSSEASHCGGAGGLPSLL
NLTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRMALYNDSQESSTHLHHSQGVVNS
RRCSDTGYSAPGMMPHEVQANLLRRASDPVRRTTFDPLSLPRVQRFNSISNMNFSRLPAL
DRRAFNLQSNTCSDGSLHRHPFSQRPPSISENVLMENMASDGGDQQEDDLVLPDDMVQYL
RSQNGSSNQDPGISFNGGHALDFHGNMTSQQQQFYGQRRISMTSNNGSHVEPICSHPEQM
ANAQDMNKNNMPVQWNEVSSGSVETNARLPKQQQLRGNLAVVQQKQNFGPYQGFGSNQHI
VPMSQNLANMQQGYPQRTIQRMNSVQLCRQSITNSCQNLGEQVNPQPVYRQDLNFNSSQH
LTCNSMGPHNGRVVQNQQTQNFRSNFTHLNNANQQSYVPLTQTAGQNAGRGLIQPRPPSE
PKPLNRQHSGSGMVQQNGCSLSNANSSEAIPKRPGDFGQHSNGNGTVYYSGEIHMLDPSV
DYGSPMSPCANQAPVASVSTMPSPGVNQVTSTVDSTPTLEHTQIDFDAILDDGDHSSLMS
GTLSPGILQSLSQNSSRLTTPRNSVTLASIPAGIGNMAIGDMSSMLTALAEESKFLNMMA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacaagtcccagcaccacagaaaagaaggaatgcaaggtgtcaggcctggat
ggcagtagtttctcagaccttcccaaaaagccctcaccgaccacagcatctcgagctcct
catttattctcaactttccacacgccgattccgatcgacatgcgacaccatgaggggagg
taccattacgagccacaccctctgcactccatgcatggacctcatggattagctggcagt
ccagttatctctgatatctctctcatccgactatcgcctcacgctgcaactaccggagaa
tcccccttcaacccaccacacccatatgtcaacccacacatggagcactacctgcgctcc
gtccacagcagccccactctctccatgatctccgcagcacgaggactgagccctgctgac
gcagtgacccatgaacacctgaaggagcggagcttgtttggcctgccccctcccccccct
ggggccaacccctcagactactatcacctcatcaccagtcaccgcagcccttacggagac
ctgctcatgcagacgggggccgcggctactcatctccctgactacatgagcccagtggac
atgtcccgtttccccagtcccagactgacgccgagggtaagcagcaggaagcgagcgctg
tccatctccccagtctcggatgccagcatcgacctgcagaccatgatccgcacctcgccc
aactctctggtggcctacatcaataactcccgttccagctcggctgccagcagctcttac
ggacacctctccgtcggggccatcagtccgtccttcacattcccacatccgatcacacca
gttgcataccaccagctgctgtcccaacagagaagtctgaatgcatttggacacactccc
cccctcctacagccttctccttccctcagttcccggcagcagacgctggtggcagctgct
gcgctgaccaacaacagcgccgacaccaacacagagtccagccagaatgctggtggagat
cctgctgtcagcagcactgtcaaccctatgatattcaagaggtcaaaggtgaagactgaa
acagatggaccccaccccatctcacctggttctcaggatcacatggagttacgggaggaa
cttgataaagacgaatgcaagcaagaacctgaggctgtgtatgagaccaactgtcattgg
gaaggatgttccaaagagtatgacacccaggaccagctagttcatcatatcaacaatgac
cacatccatggagagaagaaagagtttgtgtgccgatgggaggagtgctcgcgagaacag
aagccttttaaggcccagtacatgcttgtggttcacatgcgtcgacacactggggagaag
ccccataagtgcacatttgaaggttgctcgaaagcttactctcgactggaaaacctcaaa
actcacttgaggtcccacacaggggagaagccttatgtatgcgagcatgagggttgcaac
aaggcgttttccaatgcttcagaccgagccaagcaccagaaccgcacacactcaaatgag
aaaccatatgtgtgtaagatcccaggttgcacaaaacgctatacagaccctagttctctc
aggaaacatgtgaagaccgttcatggtccagacgcacatgtcactaagaagcagcgtggt
gatgtgccacctaaacctcatccccctaaagggaatggagaaaatgaggcccacacaaag
catgcaagggaaaggtcagacgggctaggggaggccaacagcactactcgaggagtggag
gattgccaacatgtcaagtctatcaagacggaaaacacaatgatgtatcagtccagccct
ggtggtcagtcatcatgtagcagtgagccatcgccacttggcagtgccaccaacaatgac
agtggagtagagatggccatgcacagtggaggcagtttgggggacctgaatgctttagat
gactcacctgtagtagattctaccggttctccaggttcttctgcaggagtaggtcttcaa
ctgcgtaaaaacaggggtggactacttaatgttgatcacatcaagaaggaaaaactaaaa
atggtaagagactcctgttcctgggcgaatgcttcacctcaagtccgaaataccaagctg
cctccaataccaactattgactcattgctggagacttcaaatatgggcactcagatgcct
ggacctccaacccaacgttcaggagatttgtcttcgtatgagatgacagtccttaatcag
ctgcatgagcgcagagacagctccaccagcacgatgagctcagcatacacgctaagtcgt
cggtcctctggtatttcaccctgctactccagccgtcgctctagcgagacttcgcaattt
ggagtccgcaacaacaacgtcagctcagcagattcctatgaccccatctccacagatatg
tctcggcgctccagtgaagctagccactgcggcggggcaggtggactcccaagtttgcta
aatctcacgccggctcaacactaccgcctcaaggcgaaatacgctgcagccacagggggt
gcaccaccaacacctctaccgaacatggatcgcatgagtcttagaactagaatggccctg
tacaatgactcgcaagaaagttcaacacatttgcaccattcccaaggtgtagtcaactca
agacgctgcagtgacaccggctacagtgcccctggcatgatgcctcatgaagttcaggct
aatcttctgcgacgagcaagtgatcctgttcgtcgtacaactttcgacccgctctccttg
ccgagggttcagcgattcaacagcatcagcaacatgaacttttcccgcctgcctgcatta
gatcggcgtgctttcaacttgcagagcaacacttgttccgatggcagcttgcaccgccat
cccttcagccaaaggccacctagtatttcagagaacgttttaatggagaatatggccagt
gatggaggtgatcagcaagaggatgatttagtgcttccggatgatatggtacagtacctc
agatcccagaatggtagctccaatcaggacccagggatttctttcaatggtggtcatgca
ctagacttccatggtaatatgacctctcaacaacaacagttctacgggcaacggcgaatt
agcatgacaagcaacaatggaagccatgtcgagcctatttgctcacatccagagcaaatg
gccaatgcacaagacatgaacaagaacaacatgcctgtgcaatggaacgaggtcagttct
ggttctgttgaaacaaatgcgaggcttccaaagcagcaacaactcagagggaacttggca
gtggttcagcagaagcagaattttggcccttaccagggctttggctctaatcaacatatt
gtaccaatgagccagaatctggctaacatgcaacagggttatccacagaggaccatccag
aggatgaactctgtccagctgtgtcggcagtctattaccaattcctgtcagaatctcggc
gagcaagtaaaccctcaaccggtatatcggcaggacctcaatttcaactccagtcaacac
ctaacatgcaacagcatgggtccacataatggaagagtggtgcaaaaccaacagacgcag
aatttcagatccaactttacacatttgaataacgccaaccagcaaagttatgttcccctt
actcagactgccggtcaaaatgcaggcagaggactgatacagcccagacctccatccgag
cccaaacctttgaataggcaacactcagggtcaggtatggttcagcagaatggttgctcc
ctgtctaacgccaactcctcagaagctatcccaaagagaccaggtgactttggtcaacac
agcaatgggaacggcactgtgtactattcaggagagatccacatgttggaccccagtgtg
gattatggttcacccatgtccccgtgcgcaaaccaagcccctgttgcttcggtgtctaca
atgccgtctcctggggttaatcaggtcaccagcacagtggactccactccaacccttgag
cacactcaaatagacttcgatgccattttggatgatggagaccattcaagcctaatgtcc
ggcaccttaagtccgggcattctgcagagtctttcgcagaattcctcacggctcaccacc
cctcgtaactctgttactttagcctcgataccggcaggtattggcaacatggccattggt
gacatgagctcaatgttaacggcccttgcagaggaaagcaaattcttaaacatgatggct
tga
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integrated database retrieval system
