Pimephales promelas (fathead minnow): 120491575
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Entry
120491575 CDS
T08155
Symbol
rapgef4b
Name
(RefSeq) rap guanine nucleotide exchange factor 4-like isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04081
Hormone signaling
pprm04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
120491575 (rapgef4b)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120491575 (rapgef4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pprm04131
]
120491575 (rapgef4b)
Membrane trafficking [BR:
pprm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
120491575 (rapgef4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
RA
Motif
Other DBs
NCBI-GeneID:
120491575
NCBI-ProteinID:
XP_039545441
LinkDB
All DBs
Position
Unknown
AA seq
1021 aa
AA seq
DB search
MRASRRDLRFTPVEPKMVAVHTSAHSVASSEWIICLDKRPAERSGEDVDIILARLKGVKA
FEKFHPNLLQQICMCGFYEFLEKGITLYRQGDIGTSWYAVLSGSLDVKVSETANHQDAVT
ICTLGVGTAFGESILDNTPRHATIVSRENSELLRIEQREFKTLWEKYRQCMAGLLAPPYG
VMDSGATNDRMPDKENLNSDPLNFMSKNLNKVPSEKILRAEKVLRNAILARAPHMIRDRK
YHLKTYRQCCVGTELVDWLLQQSSCVHSRAHAVGMWQVFLEEGVLNHVDHELSFQDKYLF
YRFLDDEEEDAVLPSDDEKREAEEELQETLLFLSQIGPDAHMRMILRKPPGQRTAEDLEI
IYDELLHIKALSHLSNTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIIQKGSVNVVI
YGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDVEANTVR
LKEHDLDVLVLQKSLRPSSHGNIPAHFKYTVMSGTPEKILEHLLETMRLDIHFSDPDPTL
DDFVLMHCVFMPNSQLCPALVAHYHSQASQGSEQERLDYAVASKRRVFSLALRWAALQGH
HLLEDDTTLSFLEELHGFVSNDARVLRPLKELLPELERIIKHYPDDARTSQKKHKVLLRQ
FSSGEERLAKKQPIRSFDDILLKVYCSDHTYTTIRVSVLATGREVTAAVADKLGSTEELL
LINLSASGEKQILKPNDVSVFQSLGVNGRLFVCSREQLDSLNPLPEQEGPSTGSMSSFEL
MSSKDLAFQMTQYDWELFSCVHEYELVYHTFGRQAYRRSTANLELFLRRFNQVQLWVVTE
VCLCGTLSKRVQLLKKFIKIAAHCREFKNLNSFFAIIMGMCNPAVSRLSQTWEKLPSKFK
KFYAEFESLLDPSRNHRAYRLTVAKMEPPIIPFMPLLIKDMTFTHEGNKTFIDGLVNFEK
MRLIANTVRAVRHCRSQPFNAEASPASKNPQEVRNYVRQLNVIDNQRTLSQLSFRLEPRR
G
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgagtcgaagagatctgcgattcacaccggtcgagccgaagatggtagcggtg
cacacctctgcgcactccgtggcctcctccgagtggatcatctgcctggacaagaggcca
gcagaacgctcgggagaagatgtggatataatcctggctcggctgaagggggtgaaggcc
tttgagaagtttcacccaaacctgctgcagcagatctgcatgtgtggcttctatgagttc
ctggagaaaggcatcaccttgtataggcagggtgacatcggcaccagctggtatgcggtt
ctgtctggatctctggatgtgaaagtgtctgagacagccaaccatcaggatgctgtaacg
atctgtactttgggagtgggaacagcatttggagagtcaattctggataacactcctcga
catgccacgatcgtcagccgagagaacagtgaacttctgcgcatcgaacagagggagttc
aaaaccctgtgggagaaatacaggcagtgcatggcagggcttctcgctccgccgtatgga
gtgatggacagtggggctacaaatgacagaatgccagacaaagagaatctaaacagcgac
cctctcaattttatgtccaaaaacctgaataaggtcccatcagaaaagattttgagggca
gaaaaagtcttacgtaatgctatactggccagagctccccacatgatcagagatagaaaa
tatcatctgaaaacctacaggcagtgttgtgtcggcacggagctggtcgactggctgctt
cagcagagctcatgtgttcacagtcgagctcacgctgtgggaatgtggcaggtgttcctg
gaggaaggggtcctgaatcacgttgaccacgaactcagctttcaagataagtaccttttt
tatcgtttccttgatgacgaggaagaggatgcggtgttgcctagcgacgacgagaaacgt
gaagctgaggaagagctgcaggagaccctcctcttcctctctcagatcggccctgacgca
cacatgcgaatgatcctcaggaaaccgccaggtcaaagaacagctgaagacctagagatt
atttatgatgagctgctgcatatcaaagcactctctcatctatctaacactgtgaagaga
gagctcgctggggtcctcatctttgagtcacatgccaaagcaggcactgtcttgtttaat
caaggggaggaaggcacttcttggtatattatccagaagggatcggtaaatgttgttatc
tatggcaagggtgtggtgtgtacgctgcatgaaggagatgattttgggaaactggccctg
gtgaacgacgccccccgcgctgcatcaatcgttctgagagaggacaactgccacttcttg
agagtggacaaagaggacttcaaccgtatactcagggatgttgaagcaaacacggtgcgt
ctaaaagagcatgacctggatgttctggtactacagaagagtctccggccctccagccat
ggaaacatcccagcccacttcaaatacactgtgatgtcaggcaccccagagaagattcta
gagcatctgctggagactatgcgactggacattcatttctctgacccagatccgactctg
gatgattttgtgctcatgcactgtgtcttcatgcccaacagccagctgtgccctgccctt
gtggctcactaccactctcaggcgtctcagggctcagagcaggagcgtctagactacgct
gttgccagcaagagacgggtgttcagcttggctctgcgctgggctgccctgcagggccac
catctgctggaggatgacaccacgctcagctttctggaggagctgcatggcttcgtatct
aatgacgcaagagttttgcgtccactgaaggagctactgcctgagcttgagaggatcatt
aaacattatccagatgatgcacgaacctcccaaaaaaagcataaagtcctcctgcgacag
ttcagctctggagaggaaaggcttgcaaaaaagcagccaataaggagctttgatgacatt
ctcttgaaggtttactgcagtgatcacacttacactactattcgtgtttctgtgctggcc
acggggagagaggtgaccgcagctgtagcggataaactgggatcgactgaagagctgctt
ttgataaacctcagcgcatctggagaaaagcagattttaaagcccaatgatgtatcagtg
tttcagtcgctgggagtgaacggacgattgtttgtctgctcaagagaacagctcgattca
ctgaatccgcttccagagcaggagggtccctccacagggtcgatgtccagttttgagctg
atgagctctaaagatctggccttccagatgacccagtatgactgggagcttttcagctgt
gtacatgagtatgagctggtgtatcatacgttcggacggcaggcgtacagacgctccact
gcgaatctggagctgtttctgaggcgctttaatcaggtgcagctgtgggtggtcactgag
gtctgtctgtgcgggacgctcagcaaaagggtacagctactcaagaaattcatcaagatt
gccgcccactgtagagagtttaagaatctgaactctttcttcgccattatcatggggatg
tgcaacccagccgtgagcaggctcagccagacgtgggagaaactacctagtaagttcaag
aagttctacgcagagtttgaaagtttgcttgatccttccaggaatcaccgtgcataccgc
ctcactgtggctaagatggagccgccaatcattccctttatgcctcttctcattaaagac
atgacgttcactcatgaggggaataagacttttattgatggactggtgaactttgagaag
atgcggctgattgcaaacacagtccgtgcggtgaggcactgcaggagccagcccttcaat
gccgaggcatctccagccagtaaaaatccacaggaagtgaggaattacgtacgtcaattg
aatgtgattgacaaccagagaaccttatcgcaactgtccttcagactggagccaagacgg
ggctga
DBGET
integrated database retrieval system
