Pimephales promelas (fathead minnow): 120491883
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Entry
120491883 CDS
T08155
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pprm04812
]
120491883
Cytoskeleton proteins [BR:
pprm04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
120491883
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
TOR1L1_N
HEAT_EZ
Clp_N
Motif
Other DBs
NCBI-GeneID:
120491883
NCBI-ProteinID:
XP_039545821
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MTDEPIRSAMDSVSTEDTSLVLPSDKKQHTGQQRVLEQVKSIKRSKSKMVKSGSLPSPST
PSPATEFSEPKFQFSPGKLNGTSFKFSESSMMTSQRATGRSLSLRKSVRSQNQRESLRSL
TVKSQSNGMKASGNGFGGRNTQKSMRSSTVRYNRTSVQSMMRENNPLVSASQSQSINIKP
SSIQSQTVSKATITRSKSEGSGAYGATVEMPDMTLEEAVKKLTLSDESSQLLGASFIQHQ
TFAEDKAKEEVWRLAGIPALIQLLKSDNLQLQQTAASALRNTVFKDTNNKLEVEKCEGIE
AILTLLRNTNVAETQKQLTGLLWNLSSAEELKPELIENAMPLLTESILVPYSFETDIYTS
KLVDPEVFYNTTGCFRNLSCASEKERISMRNCTGLIDSLVTYVQTHLDRGDSDDKSVENC
VCILHNLSYQLEKEAPDHFPAFATPDVSPHANKSSQSIFSPKRTKTQKVSFPAMEVDKPK
GVNWLYHQKSLQLYLSLLSCSQKEATLEACCGALQNLTASKSPVSTVISETIIEKLYGLP
IISPLLNSANLGLQKTAMSLVGNISRVASLRSAMATEILPRVSSMVSSVTPKMVESDSSI
STACRVMHTLMMAEPNVGKTMLNQKLIDSLSALSSNVFFEKARKDAGVLLWSLWREKDFQ
NVLKKQGMNKDTFKNAVTATAYQGVQAHERKLSDVQSRSPGEYRE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgaaccgattcgctcggctatggacagcgtgtcgaccgaggacacctcgctg
gtcctgccgtccgacaagaaacagcacacgggacagcagcgcgtgctggagcaggtgaaa
agcatcaagaggagcaagtcgaagatggtcaagagtggctcccttccgtcgccttcaact
ccgtctccagcgacagagttcagcgagcctaaattccagttctcgcctggaaaactgaac
ggcacgtccttcaaattcagcgaatccagcatgatgacaagccagcgagcgactggtcgc
agcttgtctttgcgcaaatcggtgagaagccagaaccagagggagtctctgaggagcttg
actgtgaagtcccaatccaatgggatgaaggccagtgggaacggctttggtggcagaaat
acccagaagtccatgaggtcttctactgtgcgctataaccgcacaagtgtacaatccatg
atgcgggagaataacccgctggtcagcgccagccaatcgcagtccattaacatcaagcct
tcctccatccaatcacagacagtgtcgaaagcaactattaccaggagcaaatcagaagga
tcgggtgcatatggtgccactgtagaaatgcctgatatgactctggaggaagcagtgaag
aaactgacactctcggatgagagctctcagctgttgggagcttcattcatacaacaccaa
accttcgcagaagacaaagccaaagaggaggtttggcggttggcggggattcctgctctg
attcagttgctgaaaagtgacaatttacagttgcaacagacggccgcctctgcactgcgc
aacacagtttttaaagacacaaataataagcttgaggtggaaaaatgtgaaggaatagaa
gctattctaacgttgctcagaaacaccaacgtagcagaaacccagaaacaactcactggt
ttgttgtggaatctgtcctcggctgaagagctgaagccagagctgatcgagaacgccatg
cccctgcttacagaaagcattttggtgccttacagctttgagactgacatctacaccagc
aaactcgtagacccagaggtcttctacaacaccaccggctgtttcagaaacctcagctgc
gccagcgagaaggagaggatatctatgaggaactgcacgggacttatcgactctctcgtg
acttatgttcagactcatttggacagaggagattcagatgataagtcagtggaaaactgt
gtctgcatacttcataacctgagctaccagctggagaaagaggctcctgatcacttccca
gcgttcgctacccctgacgtgagcccacatgcgaacaaaagcagccagagcatcttcagc
cccaagagaaccaagactcaaaaggtcagcttcccagccatggaggtggataagcctaaa
ggagtgaattggttgtaccaccagaagtccctgcagctgtacctgtctctgctgagctgc
agtcagaaagaagccactctggaggcgtgctgtggagctctgcagaacctcacagcttca
aagagccctgtgtccactgtgataagtgaaaccatcatagagaagctgtatggcttgcct
atcatttcccctctgctgaattctgcaaacttgggcctacagaagaccgccatgtcctta
gtgggcaacatatcccgggtggcatctctacggagtgctatggccacggaaattcttccc
agagtcagctctatggtctcgtctgtgaccccgaaaatggttgaatcggacagctccatc
tctacagcgtgccgcgtgatgcacacactcatgatggctgagcctaacgttgggaagacg
atgttgaaccaaaaactcatcgactctctgagcgcgctgagttcaaatgtatttttcgag
aaagccagaaaggatgctggagttcttctctggagtttgtggagagaaaaggacttccag
aatgtgctgaaaaagcaagggatgaacaaggacacgtttaaaaatgccgtcactgctacg
gcgtaccagggggtacaagcacatgaacggaaactgagcgatgtgcagtcgaggtctcct
ggagagtacagagagtag
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integrated database retrieval system
