Pimephales promelas (fathead minnow): 120491886
Help
Entry
120491886 CDS
T08155
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120491886 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120491886 (kdm2aa)
04121 Ubiquitin system [BR:
pprm04121
]
120491886 (kdm2aa)
03036 Chromosome and associated proteins [BR:
pprm03036
]
120491886 (kdm2aa)
Enzymes [BR:
pprm01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
120491886 (kdm2aa)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120491886 (kdm2aa)
Ubiquitin system [BR:
pprm04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120491886 (kdm2aa)
Chromosome and associated proteins [BR:
pprm03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
120491886 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120491886 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JmjC
F-box
LRR_6
Cupin_8
PHD
LRR_4
JHD
zf-RING_15
Cupin_1
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
120491886
NCBI-ProteinID:
XP_039545832
LinkDB
All DBs
Position
Unknown
AA seq
1325 aa
AA seq
DB search
MENGQEILALVDGGMLLMRRRGRKRKSQQDDVTLKRSGTRRRYQDDGISDDEIDGKRTFD
LEEKLHSSRFSSDRVKHMEGKDLSYEYVQRCGLRDPIIFERPDGLGIKMPDSDFSVNDVK
LFVGSRRMIDVMDVSTQKGTEMSMAQWRRYYETPPSQREKLYNVISLEFSHTKLESLVKR
PTTVDMIDWVDNMWPRHLKERQRDATNSIMEMQYPKVQKYCLMSVQGCYTDFHIDFGGTS
VWYHILRGCKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKATDCQRIELKQGNTFIIP
SGWIHAVYTPVDALVFGGNFLHSFNIPMQLHISSIEDRTRDDFPYCFTVPAKFRYPFYYE
MGWYVLERYLYSMTNTSHLIPEFQKYSLGIGLKQESSGCEVLNGHTKEERDDNNAPSPPI
GPGVKLHLTPFELEGLWNLIGKLESLPSHKKCVPSGIHNAAALLHDIRALLKDHANDIPK
LSYTGKPIVRWPRRPPWYQPPPPPPPVIRPKLSTTPVISRPVKPASNMSVLRRRRVRCKR
CEACLRTECGDCNFCRDMKKFGGPGKLKQTCVLRQCLAPGLPLSAVCEICEEGNQETSEE
LMECSNCAQIAHPSCLKTSGEGVVNKDLPSCWECPKCVFGKETDSESSGSGDDITAQDGS
GGRGGEGGAWHGVGRPPSSLSHGSLQKRATAPEQRLRKRLKLEAGKTHKRKSSSLDPRVA
KIYRRHGMDHDDDSGSDDDGDSGKLSSVRGGVSSSRRGYGAGRRGVWRGSSHRGSRGGGS
LATSSLKMRRGLGARGERGGRVRLRGGSQMRRRRYETEDEDDDDDDDDDEGDDDDDDDED
DSDEERHLSRSDKDHRSRRRRQRGDDYDDDDEDDDEEDSDEQDFDGEDDEMEDLDDGEED
DEDGENQSDSDPDPPVLLVSDLNDDLLNDSYLTVTLQRPPKAKRDPGSIVPKLEAAMSPR
TPSGPGFVQRKTLPRTRLRSSTSTPSGNGLSQSKSAHTSGRHTRRNSNQDGRDRDTPSPS
SMSSRSSVSPPPPPPAVTTSSPPSLLSHPSFRDVGNERGCEKDIWVSVFRYLGRTDLAVC
MRVCKAWYKWCCDKRLWTRIDLSRCRALTPQALSAVIKRQPVTLDLSWTPVSKKQIAWLI
HHLPSLKDLIMSGCSSLCVSALSSQSCPVLRTLDLCWAVGVKDSQIKDLIVLPGSESRSR
LRGLLTLRLSGLDISDSVLKMIVRHMPSLRRLDLSHCQGLTDQSINLLTATGCNTRNTLR
QLNLSGCNKLTDACLSYMKRLSALALLDLRGCRNVTRHGCENFISDLSYCTLFCLTEEKL
IQRIS
NT seq
3978 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggacaggagatccttgcgcttgttgacggggggatgttgttgatgaggcgg
agaggcaggaagaggaaaagccagcaggatgatgtgacactgaagcggtctggcacacgg
cggcgttaccaagacgatggcatttccgacgacgagatcgatggaaagaggactttcgat
ctggaggagaagctgcatagtagccgcttcagctctgaccgagtcaaacacatggagggc
aaagacctctcttacgagtacgtgcagagatgtgggctccgggatcccatcatctttgaa
agacctgatggacttggaattaaaatgccggattcagacttcagcgtgaatgatgtgaag
ttgtttgtaggaagtcggcggatgattgacgtgatggatgtgtctactcaaaagggcaca
gagatgtcaatggcccagtggaggcgctattatgagactcctccctctcagagagagaag
ctttataatgttatcagccttgaatttagccacactaaactagagagcctcgtcaaaaga
cctaccacggtggacatgattgactgggtggacaacatgtggccaaggcacttaaaagaa
aggcaaagagatgccacaaactctatcatggagatgcaataccccaaagtgcagaagtac
tgcctaatgagtgtgcagggctgttacacagatttccacatagactttggaggcacatct
gtgtggtaccacatactgcggggctgcaaggtgttttggctaatccccccaacgccacaa
aacctggagctttatgagaactgggtgttgtcagggaaacaaggcgacatctttcttggt
gacaaggccactgattgtcagaggattgagctcaagcagggcaacacgttcattattcca
tcgggttggattcatgcagtgtacacaccagtggatgcgcttgtatttggtgggaatttt
cttcatagttttaacatccccatgcaactgcacatctccagcattgaggacaggacaagg
gatgattttccttactgctttacggtgcctgctaagttccggtatccattttattatgag
atgggctggtacgtgttggagcgttatctgtacagcatgaccaacacatcacacctcatc
cctgagttccagaaatactctttgggcatcggtttgaagcaggaaagctcaggctgtgag
gtactgaatggccacaccaaagaggaaagagatgacaacaatgctccctctccacctatt
gggccaggggtgaagcttcacttgactccctttgagctggaggggttgtggaacctgatt
gggaagttggagtcactgccctcacataagaaatgtgtgccttcaggaatacacaatgct
gctgccctcctacacgacatacgggcgttattgaaagatcatgccaatgacatccctaaa
ctctcttacacgggaaaacccattgtcaggtggccgaggaggcccccctggtaccagccc
cctcctccccctccacctgtcattcgtcccaagctctcaaccacacccgttatttcacgg
ccagtgaaaccagcctccaatatgtcggtcctgcgacggcgccgcgtgcgctgtaaacgc
tgtgaggcctgtctacgaacagaatgtggagactgcaacttctgcagagacatgaagaaa
tttggtggccctggcaaactcaaacagacctgtgtactgcgccagtgtctcgctcctggt
ctgccgctctctgctgtatgtgagatctgtgaggaaggcaaccaggagactagtgaagag
ctcatggagtgctccaactgtgctcagatagctcatcctagctgtttgaagacatctggt
gagggagtggtgaacaaagacctaccgagctgctgggagtgtcccaaatgtgttttcggc
aaagaaaccgattctgagtcgtcaggcagcggtgatgacatcacggcacaggatgggtca
ggggggcgtgggggcgagggcggggcatggcacggggtcgggcggcccccctcttctctc
tctcacgggtcgctccagaaacgggcaacagcccctgagcagcggctcaggaagaggcta
aaattggaagctggtaaaacacataaacgcaagtcttcatctctcgatcctcgcgtggct
aagatctaccggcgacatggaatggatcatgatgatgattcaggcagcgatgacgatgga
gatagtggcaagctgtcgtcagtccggggtggggtctcttcatcccgccgtggttatgga
gctggtaggcgaggtgtttggagaggctcctcgcatcgagggagtcgagggggaggcagc
ttggcaacaagttcgctgaaaatgaggcgaggacttggggcgagaggggagagaggtggt
cgggtaaggttacgaggaggatcccagatgaggcgacggcgctatgaaacggaggatgaa
gatgatgatgacgacgacgatgatgatgagggtgacgacgatgatgatgatgatgaggat
gacagtgatgaagagaggcatcttagccggtcagataaggatcatcgttcaaggagacgg
agacaaagaggtgatgactatgatgatgatgacgaggatgatgatgaggaagacagtgat
gaacaggactttgatggagaggatgatgagatggaagacttggatgatggagaggaagat
gatgaggatggagagaaccaatcagactctgatcctgatccacctgtcttacttgtctcg
gacttgaatgatgatctgctgaacgattcctacctgactgtgaccctccagcgccctcca
aaggccaaacgtgacccgggctccattgtacccaaattagaggcggctatgtctccccgc
acacctagcggtcctggcttcgtccagcgcaaaacgctacccaggacccgactcaggagc
agtacctcgaccccttccgggaatggcctctctcagtccaaaagcgcccacacttccggc
cgccacacgaggcggaactccaaccaagatggtcgagacagagacacaccgtcaccttcc
tctatgtcttcacgttcctctgtttctccaccacctcctcctccagccgtcaccacatct
tctcctccttcgctcctctctcatccctctttccgtgatgttggaaatgagcgtggctgt
gaaaaagacatttgggtatcagtgttccgctacttgggtcggacagacttggctgtgtgt
atgagagtctgcaaggcttggtacaagtggtgttgtgataagcgcttatggacacgaata
gatctgagtcgctgtcgggcacttaccccccaagctctgtcagctgtcattaaacgacaa
cctgtgacacttgacctctcctggacacctgtatcaaagaaacagatagcctggctcatt
catcacctcccaagtttaaaagatttaataatgtcaggttgttcttcattatgcgtgtca
gcgttaagttcgcagagctgtccggttttgcgcacacttgacttgtgttgggccgtgggc
gtcaaagattcacaaattaaagaccttattgtgctgccaggcagtgaaagtcgcagtcga
ctgagaggtttactcactctgcgcttgtctggtctggatatcagtgactctgtccttaag
atgatcgtcagacatatgccatctctgcgccggttagatttgtcccattgccaggggctc
acagaccagtccatcaaccttctcacagctactggctgcaacactcgcaacacactcaga
cagctcaatctttcagggtgtaataagttgacagatgcgtgtctgtcctatatgaagcga
ttatcagctctggctctgttggatctgcgaggctgtaggaatgtgactcggcacggctgt
gaaaacttcatctctgacctgtcctactgcaccttattctgtctgacagaggaaaaactc
attcagagaatatcataa
DBGET
integrated database retrieval system
