Pimephales promelas (fathead minnow): 120492273
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Entry
120492273 CDS
T08155
Symbol
tnfaip3
Name
(RefSeq) tumor necrosis factor alpha-induced protein 3
KO
K11859
tumor necrosis factor, alpha-induced protein 3 [EC:
3.4.19.12
]
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04217
Necroptosis
pprm04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120492273 (tnfaip3)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120492273 (tnfaip3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pprm01002
]
120492273 (tnfaip3)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pprm04121
]
120492273 (tnfaip3)
Enzymes [BR:
pprm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120492273 (tnfaip3)
Peptidases and inhibitors [BR:
pprm01002
]
Cysteine peptidases
Family C64
120492273 (tnfaip3)
Ubiquitin system [BR:
pprm04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
120492273 (tnfaip3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-A20
OTU
OTU_Vertnin
Motif
Other DBs
NCBI-GeneID:
120492273
NCBI-ProteinID:
XP_039546409
LinkDB
All DBs
Position
Unknown
AA seq
781 aa
AA seq
DB search
MSQGQNFLPKFLFVSNLLKAVKIRERVPNDVVKASSSGGLIHHLRSMHRYTLEMIRMSQF
PQAFREVIQAAILDRAMQSSLEQEKRLNWCREVKKLVPLRTNGDGNCLLHAASQYLLGVQ
DTDLVLRKALYAVLKETDTSNFRTRFQTELLHSQEFTQTGLRYSTLNWEEEWVKIVEMAS
PVSSSNGLQFDSLEDIHIFVLSNILRRPIIVIADQVLRSMKSGSSFSPLNVGGIYLPLHW
PPGECYKYPIVLGYDSQHFAPLITIKDSGPEIRAVPLINPGRGGFEELRLHFLTEKEQQQ
KEKLLKDYLMLIEIPVIGLGYDPTQIITAARLDEGNLPEDMNLMEDYLQLVNHEYKRWQE
DKESSWAPHVSQRPPPFSVSQLSLIEIRCATPRCTFYVSVDTQPHCHECFEKRQAGRKPE
AISSSNHSSSSDPESRARLERSVLPSPRSAPPTAPSLSLYSETHAMKCKTPGCLFTLSVE
HDGLCERCFTARQNRSAANRPSHGWCHGQWNREREKETERERERERDTERCVLCRQEVFR
IFNGLCPPCMQRTAVSERGDAQQEEPSTEASVWATHRETERTGTTGHTWKTPAARPCKRP
GCQFFGTAEKLGFCTICYLDYQTNHQATPAIVQPRHTSEAGFQNCPRCRGQGCGAEGKAM
LEGYCNKCFVKEQSARLNQAASRGSNSPPLVTRASKPRPPPVLTSAHQAQCRRSGCKNLS
PGCTDLCPDCISRGQREGRRAQAPKEKSKQRCKTQGCDHYANQEKQGYCNECDHFKQIYR
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagggccagaacttcctgcccaagttcctgttcgtgagtaacctcctgaaggcc
gtgaaaatcagagagcgggttcccaatgacgtggtcaaggcttcgtccagcggcggcctg
atccatcacctgcgcagcatgcatcgctacaccctggagatgatccgcatgagccagttc
ccgcaggccttccgcgaggtcatccaggcggccatcttggacagggccatgcagagctcg
ctggagcaggagaagaggttgaactggtgccgtgaggtcaagaagctggtgccgctgaga
accaacggtgatgggaactgcctgcttcacgcagcctctcagtatctactaggggttcag
gacacagacctggtgctcagaaaggctctttacgcagtactgaaggaaacagacactagt
aactttaggacacgctttcagacagagcttctgcactcgcaggagttcacccagaccggt
ctgagatacagcactttgaactgggaggaggaatgggttaagattgtagaaatggcttct
ccagtgtccagcagtaatggcctacagtttgactctttagaggatattcacatatttgtg
ctttcaaatattctacggaggccgattattgttattgcagaccaagtacttagaagtatg
aagtctggttcctcgttttcacccctcaatgtggggggcatatacctgcctttgcactgg
cctcccggagaatgctacaaatatcccatagtgcttggatatgactcccagcactttgca
cccctgatcacaatcaaagatagcggcccagagatccgcgcggtgccgctgataaacccg
ggacggggagggtttgaggagcttcgattgcacttcctgacagaaaaggagcagcaacag
aaggagaagctgctaaaagactacctaatgcttatagaaatccctgtcattggcctgggc
tacgatcccacacagattatcactgcggccagacttgatgaaggcaacctacccgaggat
atgaacctgatggaggactacctacaactggtaaaccatgaatataagcgctggcaagag
gataaggagtcatcgtgggccccccatgtgtcccagcgtccccctcccttctcggtctcc
caactctctctcatcgagatccgctgcgccacaccccgatgcaccttctacgtctcggtg
gacacacaaccccactgtcacgagtgcttcgaaaagcggcaggcgggtcggaaaccagag
gccatttccagctcgaatcactcgtcgtcctcggacccggagagccgagcgagactggag
cgctccgtcctccccagccctcgttcggctccccctacggccccgagtctaagcctttac
agtgagactcacgccatgaagtgcaagacacccggatgcttgttcacactcagtgtggag
cacgacgggttgtgtgaacgctgctttacggcgaggcaaaaccggtccgctgccaacagg
ccgtctcacgggtggtgccacggtcagtggaaccgggaacgagagaaggaaacggagagg
gaaagggaacgagaaagggacaccgagagatgcgttctgtgtcgacaggaggtttttagg
atattcaatggtctttgcccgccctgcatgcagaggactgccgtttccgagaggggagac
gcccagcaagaggagccttcgactgaagcctcggtgtgggcaacgcatcgggagaccgaa
cgcacgggcaccaccggacacacctggaaaacgcctgccgcccgaccctgtaaacgcccc
ggatgccagttcttcgggacggcagagaagctgggattctgcactatatgttatctagac
taccagaccaatcaccaggccacccctgctattgtccagcccaggcacacgtccgaggcg
ggtttccagaactgtccgcggtgccgaggtcagggatgcggtgccgagggaaaggccatg
ctggagggttactgcaacaagtgcttcgtgaaggagcaaagcgctagactcaaccaagct
gctagcaggggctccaactccccgcctcttgtcacgcgggcctcgaaaccacgtccaccg
ccagtgctgaccagtgctcaccaggctcagtgtcggcgtagcggttgcaagaacctgtcc
cctggttgcacggacctgtgcccggactgcatcagccgaggccagcgagagggtcggcgc
gcccaggcgcccaaagagaaaagcaaacagcgctgcaagacgcagggctgcgatcactac
gccaatcaagagaagcaaggctactgtaacgaatgtgaccacttcaagcagatttaccga
ggctga
DBGET
integrated database retrieval system
