Pimephales promelas (fathead minnow): 120494516
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Entry
120494516 CDS
T08155
Name
(RefSeq) retinoblastoma-associated protein-like isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
pprm
Pimephales promelas (fathead minnow)
Pathway
pprm04110
Cell cycle
pprm04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120494516
04218 Cellular senescence
120494516
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pprm01009
]
120494516
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120494516
Protein phosphatases and associated proteins [BR:
pprm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120494516
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
120494516
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
Motif
Other DBs
NCBI-GeneID:
120494516
NCBI-ProteinID:
XP_039549641
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MPPKKRSSGTPQKKEFKGNTKSESPDSSENAVLSPERHKDKESEFVSLSEELRATNLICD
HAWRIWEREIRPMEKANMPYSNRQQWGACLFIAGMELEDISLTFTQFLKVVGLSVKQFIS
LVRKMDVNVDTISPKVNIAVTRLEKKYDVTFALYQRFVKTFEKIFAEPDKEKRKELWESS
WTLFLLAKGTFLQMEDDLVIAFQLLLCVLEFFTKRFTPSLLQSPYKSAVSSSTLSPPTRA
SRRNQGKTKPRPPEMNMQLLETLCKEGNCSVDEVKNVYQTTFCAFLDSVGLSGLQGLPPM
ETLSKQYEELYHKNKDFDARLFLVDDETLSPNQIEVSKVEVTPRKNFPGEDVVIPVPQTP
IRAAMNSIQQLRVDLTSASDQPSSNLLVYYKNCTVDPSEEIRKRVEELGKVFIQRFAQAV
GQHCEGLGRKRFNLGAQLYYKVMESMLKSEEKRLSVQNFSKLLNNAAFHTSLLACALEVV
LATYVGNSIKNGGFGSSGASDSIETDLCFPWILDVFQLPAFNFYKLIESFIKAEPTLKHD
MMKHLEQCEHVIMESLAWRADSPLFDLLKQSREEGPGEQAEPPATLNQPLHHNHTAADLY
LSPVRPSRQPPSTEAEPPTPGTNAPRSNSLSLFYKKLYRMAYLRLKTLFSHLLTSHPELE
PIIWTLLQHTLQNEYELMQERHLDQLIMSAMYAICKVKNVDLRFKTIVTAYKELPNANQE
TFKRVLIREGQYDSIIVFYNLVFMQKLKTNILQYSSPRPPPLSPIPRIPCSPYKNSPLRV
PGSNNVYVSPLKSSRMSPVPMTPRSRILISIGESFGSADKFQKINQMVSSTDWSLKRSLD
GGAAPKPLKRLRFDMDGQDEADGSKSSGESTLIQKLAEMSKFPLTFCTHLLSEL
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgaagaagcgcagcagcgggaccccgcagaaaaaagagttcaaagggaacacg
aagagcgaatctccggacagtagcgagaacgcagtgctgagccctgaacgacacaaggac
aaggagtctgaattcgtgtctctcagtgaggaactccgtgccacaaatctcatctgtgat
catgcttggagaatttgggagagggagatcaggccgatggaaaaggcaaatatgccgtat
tcgaacagacagcagtggggagcttgtttgttcattgctggcatggaacttgaagacatc
agcctgaccttcacacaattcctaaaagtggttggactgagtgtgaagcagttcatcagc
cttgtgaggaagatggatgtaaacgtggacacaataagccctaaagtgaacattgctgtg
acacgactggagaagaaatatgatgtgacctttgccctctaccaaagatttgtgaagact
tttgaaaaaatcttcgcagagcctgacaaagaaaagagaaaagagctttgggaaagcagt
tggaccttgttcctcttggctaagggaacatttctgcagatggaggatgaccttgtgata
gccttccagttgttgctgtgtgttctggagttcttcaccaagcgtttcactccttctctc
cttcaatccccctacaagtcagcggttagttcatccaccttgagtcctccgaccagggca
tcccggcgtaatcagggcaaaaccaaaccccgtccaccagagatgaacatgcagttgctg
gagacactgtgcaaggagggcaattgcagtgtggatgaggtgaaaaacgtgtaccagacc
actttctgtgcgttcctggactctgtgggtctgtcaggactccaagggcttcctcctatg
gaaacactttccaagcagtatgaagagctgtaccacaaaaacaaggactttgatgccagg
ttgttcttggtggatgatgaaactctttccccaaaccaaatagaagtgtcaaaggtggaa
gtgactccaagaaagaattttccaggcgaagatgttgtaattccagttccacagacccca
atcagagctgcaatgaactccatacagcagctcagggttgatctcacctcagctagtgac
cagccctcaagcaatctcctagtctattacaagaactgcactgttgacccatcagaagag
atcagaaagagggttgaggagctgggcaaggtcttcatccagaggtttgcacaggctgtg
ggccagcactgtgagggactggggagaaagcggtttaatcttggtgcccaactctactac
aaagtcatggagtcgatgctcaaatcggaggagaagagattatctgtgcagaatttcagt
aaacttctcaacaatgctgcatttcatacctcactgcttgcatgtgccctggaagttgta
ctggcaacttatgttgggaactccataaagaatggaggttttggcagctcaggggccagc
gattccattgaaactgatctgtgcttcccctggatcttggacgtcttccagcttcctgct
ttcaacttctacaagttgatagagagcttcatcaaagctgagcccaccctgaagcatgac
atgatgaagcacctggagcagtgcgaacatgttatcatggagagccttgcgtggagagcg
gactctcctctctttgacctcctgaaacagtcccgtgaggaaggacctggtgaacaagca
gagccccccgcaacattgaaccaacccctgcatcacaaccacaccgctgctgatctgtat
ctctctcccgtgcggccgagccgccaacccccgtcaacagaggctgagcccccaacacca
ggcaccaatgcaccccgttcaaactctctgagccttttctacaaaaagctgtacaggatg
gcctacctgcgactgaaaacgctgttctcgcacctgctgacctcacacccagaactggaa
cctataatatggaccctgcttcagcacaccctccagaacgagtacgaattaatgcaagag
agacacttagaccagttgatcatgtcggctatgtatgccatatgcaaggtgaagaacgtt
gacttgcgcttcaaaactattgtgaccgcttataaagagctgcccaatgctaatcaggag
acatttaagcgtgtgctgatcagagagggtcagtacgactccatcattgtcttctacaat
ctggtcttcatgcagaagctcaagactaacattcttcaatattcctctcctcggccgcca
cctctgtctcccattcctcgcatcccctgcagcccctataaaaactctcctctgcgtgtg
cccggcagcaataacgtctacgtctccccattgaaaagcagccgcatgtcccctgtaccc
atgaccccacggagcagaattcttatatcgatcggcgaatcctttgggtctgcagacaaa
tttcaaaagatcaatcagatggtgagtagcactgattggtccctcaagaggagtctggat
ggaggagccgcccccaaaccacttaagagattgcgctttgacatggatggacaagatgaa
gctgatggaagcaaatcaagtggcgagtcaacgctgatccagaagctggctgagatgagt
aagtttcctttaaccttttgtacacatctgttgtctgaactgtaa
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