Pimephales promelas (fathead minnow): 120495428
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Entry
120495428 CDS
T08155
Symbol
tcf3b
Name
(RefSeq) transcription factor 3b isoform X1
KO
K09063
transcription factor E2-alpha
Organism
pprm
Pimephales promelas (fathead minnow)
Brite
KEGG Orthology (KO) [BR:
pprm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pprm03000
]
120495428 (tcf3b)
Transcription factors [BR:
pprm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
120495428 (tcf3b)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Motif
Other DBs
NCBI-GeneID:
120495428
NCBI-ProteinID:
XP_039550932
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All DBs
Position
Unknown
AA seq
653 aa
AA seq
DB search
MNEAHQRMATVGTDKELSDLLDFSAMFAPPVANGKNRPTTLASSQFSGSGMEERSSTWAA
GDQNSPSFNQSYGEGSHYNEHDGLSSPFLGTGISGKNERGPYASFGGQPGFLPSDIAMPS
ADAMSPSGLKSGSQFYPSYPNNPRRRPSDGAMDPQPKKIRKPPGLPSSVYAATSGDDYIR
DGAAYPGSKPGTVYPGSFYMQEGLHSSSDPWAPSGPLGQSGYTAMLGNSPHINQPGSFSA
INAQDRMNYPLHGADVNGFHSGSAAYSHSSSLNGLDGILANRGPVASSSGDEIGKALASI
YPSDHNSNNFSSTPSTPVGSPQGIATGAAQWSRASGQTALSPNYEGGLHALQNKMEDQLE
EAIHVLQVHAVGQAPRIPGAHADMHGLLGAVSTSSGSMGGLTQTYSNPGLPLSNRHPAMA
GSHHDDHACLPPSSTLLQPAHASGTPQPGGAPEGFNNSSLPGGLAHSTHSSNKADVKNED
KEDDENSSVADKSEEEKKESKPSRTRARKEVFAHQVLSSLSDQGDDLDNEEDDEDLPPEL
KVEREKERRVANNARERLRVRDINEAFKELGRMCQLHLTNDKPQTKLLILHQAVNVILNL
EQQVRERNLNPKAACLKRREEEKVSGVVGDTQMQLSGAHQGLGGDGRNSVSHM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggcgcaccagagaatggctacagtgggaacagataaggaactcagtgacctg
ttggatttcagtgcgatgtttgcgccacctgtggctaatgggaagaacagaccaaccaca
cttgctagcagtcaatttagtggttcaggtatggaagagcgcagtagtacttgggctgcc
ggagatcaaaacagtccatcttttaaccagagctatggagagggttcgcactacaatgaa
catgatggactatcttccccattccttggcaccgggattagtggtaagaatgaaaggggt
ccatacgcttcctttgggggccagccggggttcttgccctcagacatcgccatgccttct
gcagatgccatgtcaccttccggtctgaagtcaggctctcaattctacccttcatacccc
aacaacccccgaagacgcccctctgatggagccatggatccccaaccaaaaaagatcagg
aagccgccaggactgccatcttcagtttatgctgccacctctggtgatgactatatccgt
gacggtgctgcctacccgggctccaaacctggcactgtgtacccaggatctttttacatg
caagagggcctacactcctcttcggacccctgggccccctctggacccttaggtcagtca
ggatacacggctatgctggggaattcgccacacatcaatcagcctggctccttctccgca
ataaatgcacaagacaggatgaactaccctttgcatggagcggacgtcaatggcttccat
tcgggctccgcagcctatagccactcgtcctccctgaatggattagacggcattttggcc
aatagaggcccagttgcaagcagctcaggtgatgagatcggaaaagctcttgcttcgatc
tacccttcggaccacaacagcaacaacttctcctccactccttccactcctgtgggctcc
cctcagggcattgcaacaggtgcagcacagtggtcgagagcttctggccagactgctctg
tctcctaactatgagggtggacttcatgcactgcagaacaaaatggaagaccaactggag
gaggccattcacgtgctccaagttcatgcggtgggccaggccccgagaattcctggagct
catgccgacatgcatggcctactgggtgccgtctccacatccagcggatccatggggggt
ctcactcagacttattccaacccaggactgcccctaagtaacagacaccctgccatggct
ggaagccatcatgacgaccatgcctgccttcctcccagcagcaccctgttgcagccagct
catgcttcaggcaccccacagcctggaggagcaccggagggttttaacaattcgagtttg
cctggaggcttggcccactccacgcattcgtcaaacaaagccgacgttaagaatgaagac
aaggaggatgacgagaactcctcagtggccgataagtctgaagaagagaagaaggaaagc
aaaccgtctcgcactagagcaagaaaggaggtgtttgcccatcaagtcctttcaagttta
tcagaccagggagacgatctagacaatgaagaagatgatgaggatttgccgccagagttg
aaggtcgagagggagaaggagcgacgagtggccaacaacgcacgagagcgactgcgcgtg
cgcgacattaacgaggccttcaaagagctgggccgcatgtgccagctgcacctgaccaac
gataaaccccagaccaaactgctcatcctgcaccaggccgtcaacgtgatactaaacttg
gagcaacaagtccgtgaacgcaacctgaaccccaaagcagcatgtctgaagcgacgtgaa
gaggagaaagtgtccggggtggttggagacactcaaatgcagctgtccggagcacatcaa
ggccttggaggagatggacgcaactctgtcagtcacatgtga
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