Pseudomonas protegens Cab57: PPC_3781
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Entry
PPC_3781 CDS
T03613
Name
(GenBank) ornithine cyclodeaminase
KO
K01750
ornithine cyclodeaminase [EC:
4.3.1.12
]
Organism
ppro
Pseudomonas protegens Cab57
Pathway
ppro00330
Arginine and proline metabolism
ppro01100
Metabolic pathways
ppro01110
Biosynthesis of secondary metabolites
ppro01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ppro00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
PPC_3781
Enzymes [BR:
ppro01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.12 ornithine cyclodeaminase
PPC_3781
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OCD_Mu_crystall
UDPG_MGDP_dh_C
KARI_N
DUF7714
Motif
Other DBs
NCBI-ProteinID:
BAO63128
LinkDB
All DBs
Position
4188262..4189323
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AA seq
353 aa
AA seq
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MTLFIDVDQAAALYKRLGVARAIREMAGYIQADYLRWQAFEKSPRTANHSPTGVIELMPA
DDGQQYAFKYVNGHPGNPARQLLTVMAFGVLAEVDSGYPVLLSELTLTTAVRTAATSALV
ARALARPDSRTMALIGNGAQSEFQAIAFHDMLGIDELRIFDIDPAASRKLKHNLQAWPGL
KVRIAESVADAVKGADIVTTVTADKAYATILTPELIEPGMHLNAVGGDCPGKTELHAEIL
RNARVIVEFEPQTRIEGDIQQLPADFAVTEYFRIAQGLEPGREHARQVTVFDSVGFALED
FSSLRYLHDQAREHGIGERIHLVPTPANIKDLYQLIGQDPDAATGAPRRLASG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgtttatcgatgtggatcaggcagcggcgctgtacaagcgcctgggtgtcgcc
agggcgatccgtgaaatggccggttatatccaggccgactacctgcgctggcaagccttc
gaaaagtccccgcgcaccgccaaccactcgcccaccggagtcatcgaactgatgcccgcc
gacgatggccagcagtacgccttcaagtacgtcaacggccaccctggcaatccggcccgg
cagttgctcacggtcatggccttcggcgtgctggccgaggtggacagcggctacccggtg
ctgctcagcgaactgaccctgaccaccgcggtacgcaccgccgccacctcggccctggtg
gcccgtgccctggcgcgcccggacagccgaaccatggcgctgatcggcaatggcgcccag
agcgagttccaggccatcgccttccacgacatgctcggcatcgacgagctgcggatcttc
gacatcgacccggccgcctcccgcaagctcaagcacaacctgcaagcctggccgggcctg
aaggtgcgcatcgccgagtcggtggccgatgcggtcaagggcgccgacatcgtcaccacg
gtgaccgcggacaaggcctacgccaccatcctcaccccggagctgatcgagcccggcatg
cacctcaacgcggtgggcggcgactgcccgggcaagaccgagctgcacgcagagatcctg
cgcaatgcccgggtgatcgtcgagttcgagccgcaaacgcgcatcgagggtgatatccag
cagttgccggcagactttgcggtgaccgaatacttccgcatcgcccagggcctggaaccg
ggccgcgagcatgcccggcaggtcacggtgttcgactcggtaggctttgccctggaggac
ttctcgtccctgcgctacctgcacgaccaggcgcgcgaacacggcattggcgagcggatc
cacctggtgccgaccccggccaacatcaaggacctgtaccaactgatcggccaggacccc
gacgccgccacaggcgccccgcgccgcctggccagcggctga
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