Paroceanicella profunda: FDP22_00270
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Entry
FDP22_00270 CDS
T06319
Name
(GenBank) IS21 family transposase
Organism
ppru
Paroceanicella profunda
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
HTH_IclR
MerR
HTH_23
HTH_7
MerR_1
HTH_24
HTH_29
Sigma70_r4_2
HTH_28
HTH_Tnp_ISL3
AbiEi_4
HTH_AsnC-type
HTH_11
HTH_38
HTH_3
HTH_17
HTH_Tnp_Tc3_1
Sigma70_r4
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QDL93517
UniProt:
A0A5B8FIB4
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Position
complement(70917..72446)
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AA seq
509 aa
AA seq
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MDFLSVIRRWALRDKMPIREISRRTGLSRNTIRRYLRAGIVEPKFKAPSRPSKLDPYAEK
LSGWLLAEQRKSRKERRTAKQMHADLVQLGFDGSYERVSAFVRAWKSDRQRAQNTTDRGT
FVPLVFKPGEAFQFDWSEDYAIVGGERTKLQVAHIKLSHSRVFLVRAYLLQTHEMLFDAH
WHAFRIFEGVPGRGIYDNMRTAVDRVGVGKKRDVNARFMAITSHYVFEPDFCNPAAGWEK
GQVEKNVRDARSRMWQVMPTFPDLDALNCWLEERCKALWAETAHGGLPGSIADVWQAEKP
SLMPLPTAFDGYVEQSKRVSPTCLVTFDRNRYSVPASFANRPVSLHIYPERLVVVAEGHV
VCEHQRIIERSHRQPGRVIYDWRHYLAVIQRKPGALRNGAPFVEMPRGFRELQDQMLRRP
GGDREMVDVLSLVLHHDEQAVLCAVDMALKAGVPTKTHVLNLLHRLVNGTSVELPDVTPP
PALTLSKEPEANVARYDGLRTSGGKRHAS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggattttttgagcgtcattcgacggtgggcactgcgggacaagatgcccatccgcgag
atttcgcggcggactggactgtcccgaaatacgatcaggcgttacctgcgtgccgggatc
gtcgagcccaagttcaaggcaccatcgaggccgagcaagctcgacccgtacgcggagaag
ctgtcgggctggttgctggccgaacagcgcaaatcgcgcaaagagcggcggacggcgaaa
cagatgcacgcggatctggttcagctggggttcgatgggtcctacgagcgggtctcagcc
tttgtccgagcctggaaatcggaccggcagcgcgcgcagaacacgacggatcgcgggaca
ttcgtgcctctggtgttcaagccgggcgaggccttccaattcgattggagcgaagactac
gcgatcgtcgggggtgaacggaccaagctgcaggtcgcacacatcaagctgtcgcacagc
cgcgtgttcctggtcagggcatatttgctgcagacacacgagatgctgttcgacgcgcat
tggcatgcgttcagaatcttcgaaggcgtgccgggccgcgggatctacgacaatatgcgc
acggcggtggaccgcgtgggcgtcggcaaaaagcgcgatgtaaatgcgcgcttcatggcg
ataaccagccactacgtgttcgaacccgacttttgcaatccggcggcgggatgggaaaag
ggccaggtcgagaagaacgtccgcgatgcgcgcagcaggatgtggcaggtgatgcccacc
ttccctgatctcgatgcgctgaactgctggctggaagaacggtgcaaggcgctgtgggcc
gaaaccgcacatggcggtttgcccggcagcatcgcagacgtctggcaagcggagaagccc
tcgctgatgccgttgcccaccgcgttcgacggttatgtcgagcaaagcaagcgggtgtcc
ccaacctgcctcgtcacgtttgatcgcaatcgctactccgtgcctgccagctttgcgaac
cggccagtcagcctgcacatctaccccgaaaggctggttgtcgttgctgaagggcatgtc
gtctgcgagcaccagcgcatcattgaaaggtcgcatcggcaaccgggccgcgtcatctat
gactggcggcattacctggccgtgatccagcgcaagcccggtgcgctgcgtaacggcgcc
ccgtttgttgagatgccgaggggctttcgtgagctgcaggatcagatgctgcgcagaccc
ggcggtgatcgggagatggtcgacgtcctgtcgttggtattgcatcacgacgaacaggcg
gtcctgtgcgcggtggacatggcgttgaaggccggcgtgccgacaaagacccacgtgctg
aacctattgcacaggctggtgaacggcacttcagtcgagttgccagacgtaacgccgcct
ccggccttgacgctgagcaaggagcccgaggccaatgttgcacgctacgatgggctgcgc
acatccggaggcaaacgccatgcgtcatga
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