| Entry | T06319 |
| Org code | ppru |
| Name | Paroceanicella profunda D4M1 |
| Category | Type strain |
| Annotation | yes |
| Taxonomy | TAX: 2579971 |
| Lineage | Bacteria; Pseudomonadati; Pseudomonadota; Alphaproteobacteria; Rhodobacterales; Paracoccaceae; Paroceanicella |
| Brite | KEGG organisms [BR:br08601]
KEGG organisms in the NCBI taxonomy [BR:br08610]
KEGG organisms in taxonomic ranks [BR:br08611] |
| Data source | GenBank (Assembly: GCA_005887635.2 Complete Genome)
BioProject: 541207 |
| Comment | Piezophilic alphaproteobacterium.
Isolated from deep seawater of the Mariana Trench.
|
| Chromosome | Circular |
| Sequence | GB: CP040818 |
| Length | 4039866 |
| Plasmid | pD4M1A; Circular |
| Sequence | GB: CP040819 |
| Length | 586520 |
| Plasmid | pD4M1B; Circular |
| Sequence | GB: CP040820 |
| Length | 288677 |
| Plasmid | pD4M1C; Circular |
| Sequence | GB: CP040821 |
| Length | 189758 |
| Plasmid | pD4M1D; Circular |
| Sequence | GB: CP040822 |
| Length | 137471 |
| Plasmid | pD4M1E; Circular |
| Sequence | GB: CP040823 |
| Length | 114056 |
| Plasmid | pD4M1F; Circular |
| Sequence | GB: CP040824 |
| Length | 112235 |
| Statistics | Number of nucleotides: 5468583
Number of protein genes: 4673
Number of RNA genes: 70
|
| Created | 2019 |
| Reference | PMID: 31743595 |
| Authors | Liu P, Ding W, Lai Q, Liu R, Wei Y, Wang L, Xie Z, Cao J, Fang J |
| Title | Physiological and genomic features of Paraoceanicella profunda gen. nov., sp. nov., a novel piezophile isolated from deep seawater of the Mariana Trench. |
| Journal | Microbiologyopen e966 (2019)
DOI: 10.1002/mbo3.966 |
Paroceanicella profunda