Paroceanicella profunda: FDP22_00450
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Entry
FDP22_00450 CDS
T06319
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDP22_00450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_00450
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
FDP22_00450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
SBP_bac_11
Gp44-like_2nd
Motif
Other DBs
NCBI-ProteinID:
QDL90395
UniProt:
A0A5B8FPZ7
LinkDB
All DBs
Position
104799..105842
Genome browser
AA seq
347 aa
AA seq
DB search
MTRISRGLYCSLPVLAALCALPAAAEEVMFVSQGGAYQEAQTKAILDPVAEKLGITVKQD
SSPDAWPVIKTQTATGQPIWDVIDTPTKDCVRGGQQGMIEPLDLAKLPNLAAMPADYRTD
YSVAYEFYSSVLAYSTQAYGDTPPQSWADFWDVEKFPGPRALRNHPLATLEAALMADGVK
PQDMYPLDIDRAFAKLEEIKPYITVWWSSGAQSAQLLADGEVDMEMAWNGRVSSIAKEGA
PVAFTYNQGMLQFTSLCILKDAPNLDTAWKFVNAAMDPEIQANFPAYIDYGPGNPAAYDT
GKISPERAAEMPSAPANASRQVLVSTDWWTSPEGEEVLKRWAEFIQQ
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggatttccaggggtctctactgttctctgccggttctggccgcgctgtgcgcc
ctgcccgcggccgcggaggaggtgatgttcgtgtcccagggcggcgcctatcaggaggcc
cagacaaaggccatcctcgacccggtggccgagaagctcggcatcaccgtgaagcaggac
agcagccccgatgcctggccggtgatcaagacccagaccgccacgggacagccgatctgg
gacgtgatcgacacccccacgaaggattgcgtgcgcggcggccagcagggcatgatcgag
ccgctcgaccttgcgaagctgccgaacttggccgccatgccggcggactatcgcacggat
tactcggtggcctacgagttctattcctccgtcctcgcctattccacccaggcctatggc
gacaccccgccgcaaagctgggcggatttctgggacgtggagaagttccccgggccgagg
gcgcttcgcaaccacccgctcgcaacgctggaggcagccctgatggccgacggggtgaaa
ccgcaggacatgtacccgctcgacatcgaccgcgccttcgccaagctggaggagatcaag
ccctacatcaccgtgtggtggagctccggcgcccagtccgcccagctgctggccgatggc
gaggtggacatggagatggcctggaacggccgtgtctcctccatcgccaaggagggcgcc
ccggtggccttcacctacaaccagggcatgctgcagttcacctcgctgtgcatcctgaag
gacgcgccgaacctcgacaccgcgtggaagttcgtgaacgccgcgatggacccggagatc
caggccaacttcccggcctacatcgactacgggcccggcaacccggccgcctacgacacc
ggcaagatcagcccggagcgggccgccgagatgccgagcgcgccggcgaacgcctcccgc
caggtgctggtctccaccgactggtggacctcgccggagggggaggaggtgctcaagcgc
tgggccgagttcatccagcagtga
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