Paroceanicella profunda: FDP22_01040
Help
Entry
FDP22_01040 CDS
T06319
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00470
D-Amino acid metabolism
ppru00550
Peptidoglycan biosynthesis
ppru01100
Metabolic pathways
ppru01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FDP22_01040
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FDP22_01040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
FDP22_01040
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppru01011
]
FDP22_01040
Enzymes [BR:
ppru01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
FDP22_01040
Peptidoglycan biosynthesis and degradation proteins [BR:
ppru01011
]
Precursor biosynthesis
Amino acid ligase
FDP22_01040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATPgrasp_ST
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
QDL90501
UniProt:
A0A5B8FFX2
LinkDB
All DBs
Position
complement(245920..246834)
Genome browser
AA seq
304 aa
AA seq
DB search
MSSRTQPRIAVLLGGPSGEREVSLVTGRECAAALRSEGYEVVEIDAGDSLAEDLRATAPD
VVFNALHGRWGEDGCVQGLLEWLRIPYTHSGVLASALAMDKLRSKEAYAAAGLPVAEAML
VDAADIRRSHPMPPPYVVKPYNEGSSLGIYFVTEGANAPAALDGAMPGRLMVERYVPGRD
LTVAVLDGKALAVTDIITEGWYDYSAKYTVGGSRHVLPADLPKEITRACLDYAERAHAAL
GCRGVSRTDFRWDESRGLDGLVLLETNTQPGMTPTSLAPEQAAYTGMSFGAFTRWLVEDA
SCSR
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagcaggacacagccccggattgcggtactcctaggcgggccgtcgggcgagcgc
gaggtttcgctcgtcacgggccgggaatgcgccgcagcactccggagcgaaggatacgaa
gtggtggagatcgacgcgggcgacagcctcgcggaggatctgcgcgccacagcgcctgac
gtggtgttcaacgcgctgcacggccgctggggcgaggacggctgcgtccagggcctgctc
gaatggctccgcatcccctacacccattccggcgtgctggcctcggccctcgcgatggac
aagctgcgctccaaggaggcctatgccgctgccggactgccggtggccgaggcgatgctg
gtcgatgccgcggacatccgccgctcacaccccatgccgccgccctacgtggtcaagccc
tacaacgaaggctcttcgctgggcatctacttcgtgaccgagggcgcgaacgccccggcc
gcgctggacggggccatgcccgggcggctgatggtcgaacgctacgtgccggggcgcgac
ctcaccgtcgcggtgctggacggcaaggcgctggcggtgaccgacatcatcaccgagggc
tggtacgactactcggcgaaatacaccgtgggcggctcgcgccacgtgctgcccgccgac
ctgccgaaagaaatcacccgcgcctgcctcgactatgccgagcgcgcccatgccgccctg
ggctgccggggcgtgagccggaccgatttccgctgggacgagagccgcgggctcgacggc
ctggtgctgctggaaaccaacacccagccgggcatgacgccgacctcgctcgcccccgag
caggccgcctacaccggcatgtccttcggcgccttcacgcgctggctggtggaggacgcc
tcttgcagccgctga
DBGET
integrated database retrieval system
