Paroceanicella profunda: FDP22_01600
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Entry
FDP22_01600 CDS
T06319
Symbol
rpsM
Name
(GenBank) 30S ribosomal protein S13
KO
K02952
small subunit ribosomal protein S13
Organism
ppru
Paroceanicella profunda
Pathway
ppru03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
FDP22_01600 (rpsM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ppru03011
]
FDP22_01600 (rpsM)
Ribosome [BR:
ppru03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
FDP22_01600 (rpsM)
Bacteria
FDP22_01600 (rpsM)
Archaea
FDP22_01600 (rpsM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S13
H2TH_5
HHH_5
PGM_PMM_II
NFACT_N
H2TH
Motif
Other DBs
NCBI-ProteinID:
QDL90593
UniProt:
A0A5B8FX04
LinkDB
All DBs
Position
complement(373874..374242)
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AA seq
122 aa
AA seq
DB search
MARIAGVNIPTGKRVEIALTYIHGIGNTTAKEICSAVGIESSRRVNELSDAEVLAVREFI
DANVAVEGDLRRERAVNIKRLMDLGCYRGLRHRRGLPVRGQRTHTNARTRKGPARPIAGK
KK
NT seq
369 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgcattgcgggcgtaaacatcccaaccggaaaacgcgttgagatcgcccttacc
tatattcatggcatcggtaacacgacggccaaggaaatctgctctgcggtcgggatcgaa
tccagccgccgggtgaacgaactgtctgacgccgaagtcctcgccgtgcgcgagttcatc
gacgccaacgtggcggtggaaggtgacctgcggcgtgagcgcgccgtgaacatcaagcgc
ctgatggacctgggctgctaccgcggcctgcgccatcgtcgcggccttccggtgcgtggt
cagcggacccacaccaatgcccgcacccgcaagggtcccgcacggcccatcgccggcaag
aagaagtaa
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