Paroceanicella profunda: FDP22_01850
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Entry
FDP22_01850 CDS
T06319
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FDP22_01850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppru03400
]
FDP22_01850
Enzymes [BR:
ppru01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FDP22_01850
DNA repair and recombination proteins [BR:
ppru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FDP22_01850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Auxin_canalis
Motif
Other DBs
NCBI-ProteinID:
QDL93546
UniProt:
A0A5B8FXA4
LinkDB
All DBs
Position
416295..417218
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AA seq
307 aa
AA seq
DB search
MLEWLIELGVDEASSEDPVCRYGPAPAPQAAPDLTPDPAHGPAYAPSDAPAAPAGARQGG
APAPAGTARGATPTARAPAGRPPVAAPEIRRAAEDPAEEQIRAARAAAGAAVSLDGLAAA
LAAFDGCALKRGARTTVFADGNPAARLMVIGEAPGREEDAAGRPFVGRSGQLLDLMLSAI
GLSRRAEDPAQAVYITNVLPWRPPQNRDPSSDEIAMLTPFLHRHIALARPEVLLLMGRTA
ASTLLGTATGITRLRGTWAEVDGLPAMPTFHPAALLRNPLQKRPVWADLLAVAERMGLPA
APARPGP
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatggctgatcgaactcggcgtcgacgaggcctcgagcgaggaccccgtgtgc
cgctacggccccgcgccggccccgcaggcggcgccggacctgacaccagatccggcgcat
ggcccggcgtatgctccgtcagacgcaccggcggcgcccgcgggggcgcgccagggcggc
gctccggcgccggcgggcacggcccggggcgccacacccacggcgcgcgcgccggccggg
cgaccccccgtcgccgcccccgagatccgccgcgccgcggaggaccccgccgaggagcag
attcgcgccgcgcgggccgcggccggcgccgcggtgtcgctcgacgggctcgcagccgca
ctggccgccttcgacggctgcgccctgaagcgcggcgcgcgcaccaccgtcttcgccgac
gggaaccccgccgcccggctgatggtgatcggcgaggccccgggccgcgaggaggatgcc
gccggccggcccttcgtcgggcgctccggccagttgctggacctgatgctctccgccatc
ggcctgtcgcgccgcgccgaggacccggcccaggcggtctacatcaccaacgtgctgccc
tggcggccgccgcagaaccgcgacccctcctccgacgagatcgccatgctcacgcccttc
ctgcaccggcacatcgcgctggcgcggccggaggtgctgctgctgatggggcgcaccgcc
gcctccaccctgctgggcaccgccaccggcatcacccggctgcgcggcacctgggcggag
gtggacgggctgccggccatgcccacgttccaccccgccgccctgctgcgcaacccgctg
cagaagcgccccgtctgggccgacctgctggccgtggcggagcggatgggcctgcccgcc
gcccccgcccgcccggggccctga
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