KEGG   Paroceanicella profunda: FDP22_02345
Entry
FDP22_02345       CDS       T06319                                 
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
ppru  Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:ppru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ppru03016]
    FDP22_02345 (thpR)
Enzymes [BR:ppru01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     FDP22_02345 (thpR)
Transfer RNA biogenesis [BR:ppru03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    FDP22_02345 (thpR)
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS
Other DBs
NCBI-ProteinID: QDL90728
UniProt: A0A5B8FGD5
LinkDB
Position
complement(524649..525191)
AA seq 180 aa
MRLFAAIPLPEAAVARLEILSAGLPAGRPEPPENYHVTLGFFGECDRHLAEELHLGLEEI
RLAGPVSLDITGLGMFGGARPRLLHAALGADPALVRLQGRVMSVARAAGLSARHARFVPH
VTLARFRPGEGGGADLARWIAARAGFFAGPWSAESFCLYRSDPGRSGSVYTELAEYPFTQ
NT seq 543 nt   +upstreamnt  +downstreamnt
atgcgtctctttgctgccatcccgctgcccgaggcagcggtcgcgcgtctcgagatcctg
tcggcagggctgccggccgggcgcccggagccgccggaaaactatcacgtcacgctgggg
ttcttcggggagtgtgaccggcacctcgcggaggaactgcatctgggcctggaggagatc
cgcctggccggaccggtgtctctggacatcacggggctgggcatgttcggcggcgcgcgg
ccgcggctgctgcatgccgcgctgggcgcggacccggcgctggtccggttgcaggggcgg
gtgatgtcggtggcccgggccgcggggctctcggcgcgccatgcacgcttcgtcccgcat
gtcacgctggcgcggttccgacccggtgaggggggaggcgccgatctggcccgctggatt
gcggcccgggcagggtttttcgcggggccctggagcgcggagagcttctgcctctatcgc
tcggatcccggccggtcagggtccgtctacacggaactcgcggaatatccattcactcag
tag

DBGET integrated database retrieval system