Paroceanicella profunda: FDP22_02560
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Entry
FDP22_02560 CDS
T06319
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FDP22_02560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_02560
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
FDP22_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
QDL90768
UniProt:
A0A5B8FGE7
LinkDB
All DBs
Position
570285..571226
Genome browser
AA seq
313 aa
AA seq
DB search
MKLPAAALATSLAACLALPAFAAEPESCSTVRLSDVGWTDITATTGVASVLLEALGYEPD
VKILSVPVTYASMEKGDIDVFLGNWMPTMEGDIAKYRDAGTVDTVRENLEGAKYTLAVNA
AAAKLGIRDFADIAAHADELDGKIYGIEPGNDGNRLILDMIKTDAFGLGKFEVVESSEQG
MLAQVERNTDRDEPIVFLGWEPHPMNANFDMTYLTGGDDYFGPDLGGATVYTNTRAGYVA
ECPNVGKLLENLKFTLPMENEIMGAILDGGDDPETAASTWLSAHPDTLGPWLEGVTTIDG
GDAMAAVKSELGL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcccgccgcagccctcgccacctcgcttgccgcctgcctggccctgcctgcc
ttcgccgccgagccggagagctgcagcaccgtgcgcctctccgacgtcggctggaccgac
atcaccgccaccaccggcgtcgcgagcgtgctgctcgaggcgctgggctacgagccggac
gtgaagatcctctccgtgccggtcacctatgcctcgatggagaagggcgacatcgacgtc
ttcctcggcaactggatgcccaccatggagggcgacatcgccaagtaccgcgacgcgggc
acggtggacacggtgcgcgagaacctggagggcgcgaaatacaccctcgcggtgaacgcc
gccgccgcgaagctgggcatcagggatttcgccgacatcgccgcgcatgccgacgagctg
gacggcaagatctacgggatcgagccgggcaatgacggcaaccgcctgatcctcgacatg
atcaagaccgacgccttcgggctgggcaagttcgaggtggtcgagagctcggagcagggc
atgctggcccaagtggagcgcaacaccgaccgcgacgagcccatcgtgttcctcggctgg
gaaccgcacccgatgaacgccaatttcgacatgacctacctcaccggcggcgacgactac
ttcggcccggatctcggcggcgccacggtctacaccaacacccgcgcgggctacgtggcc
gagtgcccgaatgtcggcaagctgctggagaacctcaagttcaccctgccgatggagaac
gagatcatgggcgccatcctcgatggcggcgatgacccggagacggccgccagcacctgg
ctctccgcccacccggacacgctgggcccctggctcgagggcgtgaccaccatcgacggc
ggcgacgccatggccgcggtgaagagcgaactcgggctctga
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