Paroceanicella profunda: FDP22_02930
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Entry
FDP22_02930 CDS
T06319
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FDP22_02930 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppru01007
]
FDP22_02930 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppru03016
]
FDP22_02930 (aspS)
03029 Mitochondrial biogenesis [BR:
ppru03029
]
FDP22_02930 (aspS)
Enzymes [BR:
ppru01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FDP22_02930 (aspS)
Amino acid related enzymes [BR:
ppru01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FDP22_02930 (aspS)
Transfer RNA biogenesis [BR:
ppru03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FDP22_02930 (aspS)
Prokaryotic type
Other AARSs
FDP22_02930 (aspS)
Mitochondrial biogenesis [BR:
ppru03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FDP22_02930 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
Motif
Other DBs
NCBI-ProteinID:
QDL90829
UniProt:
A0A5B8FWF1
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All DBs
Position
complement(658603..660381)
Genome browser
AA seq
592 aa
AA seq
DB search
MHAYRTHTCAALTKADVGTTVRLSGWVHRVRDHGGILFIDLRDHYGITQVLCDPDSPAFA
GVEKVRSEWVIRIDGEVKARAPELVNPKLPTGEIEVFVRDFEVLGAAEELPLPVFGDQEY
PEETRLKYRFLDLRRDKLHSSIMLRSKVISSLRRRMTDQGFNEFQTPILTASSPEGARDF
LVPSRLHPGKFYALPQAPQQFKQLCMIAGFDRYFQIAPCFRDEDPRADRSPGEFYQLDIE
MSFVTQEDVFRAIEPVMRGVFEEFGGGRPVTPEFPRIAYRDSMLWYGSDKPDLRNPIKMQ
VVSEHFAGSGFKIFAALLEQEGTQIRAIPAPGGGSRKFCDRMNAFAQKEGLPGMGYIFWR
EENGETAAAGPLAKNIGPERTEAIRQQLGLGVGDAAFFLGGQPSSFEAVAGKARNAIGLE
LGLTATDRFDFCWIVDFPMYEKDPDSGKLDFSHNPFSMPQGGLEALETMNPLDVLGFQYD
IVCNGIELSSGAIRNHKPEVMYKAFEIVGYSKEHVDAHFGGMLSAFRYGAPPHGGIAPGV
DRMVMLLADAENIREVIMFPMNQRAEDLMMQAPAEATNEQLRELGLRVIPRD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgcacgcctaccgcacccacacctgcgccgcgctcaccaaggccgacgtgggcacaacc
gtccgcctctccggctgggtgcaccgcgtgcgcgaccatggcggcatcctgttcatcgac
ctgcgcgaccattacggcatcacccaggtgctctgcgaccccgacagcccggccttcgcc
ggggtggaaaaggtgcgctcggaatgggtgatccgcatcgacggcgaggtgaaggcccgc
gcgccggagctggtgaaccccaagctccccaccggcgagatcgaggtcttcgtgcgtgac
ttcgaggtgctgggcgcggccgaggagctgcccctcccggtgttcggcgaccaggagtac
cccgaggagacccgcctcaagtaccgcttcctcgacctgcgccgcgacaagctgcattcc
tcgatcatgctgcgctcgaaggtgatctccagcttgcgccgccgcatgaccgaccagggg
ttcaacgagttccagaccccgatcctcaccgcctcctcgcccgagggcgcgcgcgacttc
ctcgtgccgtcgcggctgcacccgggcaagttctacgccctgccgcaggcgccgcagcag
ttcaagcagctgtgcatgatcgcgggcttcgaccgctacttccagatcgccccctgcttc
cgcgacgaggacccccgcgccgaccgcagcccgggcgagttctaccagctcgacatcgag
atgagcttcgtcacccaggaggacgtgttccgggccatcgagccggtgatgcgcggcgtg
ttcgaggagttcggcggcggccggccggtgaccccggaattcccccgcatcgcctatcgc
gactccatgctgtggtacggctccgacaagcccgacctgcgcaaccccattaaaatgcag
gtggtctccgagcatttcgccggctccggcttcaagatcttcgcggcgctgctggagcag
gagggcacgcagatccgcgccattcccgcgcccgggggcggcagccgcaagttctgcgac
cgcatgaacgccttcgcccagaaagagggtctgcccggcatgggctacatcttctggcgt
gaggagaacggcgagaccgccgccgcaggcccgctcgcgaagaacatcggcccggagcgc
accgaggccatccgccagcagctcggcctcggcgtgggcgacgcggccttcttcctcggc
ggccagccgtcgagcttcgaggccgtggcgggcaaggcgcgcaacgcgatcgggctggaa
ctgggcctcaccgccaccgaccgcttcgacttctgctggatcgtcgacttcccgatgtac
gagaaggaccccgacagcgggaagctcgacttctcgcacaacccgttctccatgccgcag
ggggggctcgaagcgctcgagaccatgaacccgctcgacgtgctgggcttccagtacgac
atcgtgtgcaacggcatcgagctctcctcgggcgcgatccggaaccacaagccggaggtc
atgtacaaggccttcgagatcgtcggctactcgaaggagcacgtggacgcgcatttcggc
ggcatgctctcggcgttcaggtatggcgcccccccgcatggcggcatcgcgcccggcgtg
gaccggatggtgatgctgctggccgatgcggagaacatccgcgaggtcatcatgttcccg
atgaaccagcgcgccgaggacctgatgatgcaggccccggccgaggccaccaatgagcag
ctccgcgagctcggcctgcgcgtgatcccgcgcgactga
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