Paroceanicella profunda: FDP22_03225
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Entry
FDP22_03225 CDS
T06319
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppru03021
]
FDP22_03225 (nusA)
03009 Ribosome biogenesis [BR:
ppru03009
]
FDP22_03225 (nusA)
Transcription machinery [BR:
ppru03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
FDP22_03225 (nusA)
Ribosome biogenesis [BR:
ppru03009
]
Prokaryotic type
rRNA transcription factors
FDP22_03225 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
S1
KH_NusA_C
KH_1
KH_KhpA-B
E2F_CC-MB
Motif
Other DBs
NCBI-ProteinID:
QDL90883
UniProt:
A0A5B8FXT6
LinkDB
All DBs
Position
720216..721844
Genome browser
AA seq
542 aa
AA seq
DB search
MSSTVSANRLELLQIAEAVAREKLIEPELVIEAMEDSLGKAARSRYGAEYDIRAHIDRRS
GELSMSRVREVVEEVENHFTEMTLEEARAKNPEAEIGAIIADPLPTLDLGRIAAQSAKQV
IVQKVREAERERQYDEFKDRIGTIINGLVKRVEYGNVIVDVGRGEAIIRRDQMIPREAYR
NGDRIRAYVKDVRQETRGPQIFLSRTAPEFMAALFKMEVPEIYDNVIEIKAVARDPGSRA
KIGVISYDHSIDPVGACVGMRGSRVQAVVAELQGEKIDIIPWTEDTATFLVNALQPAEVS
KVVIDEDSERIEVVVPDDQLSLAIGRRGQNVRLASQLTGWDIDIMTEAEESERRQAEFAV
RSKMFMDSMNVDEMVAQLLVSEGFTSLEEVAYVEMDDLLSIDGFDEETAEELQARARESL
EELNNQATEKARELGVEESLFAFEGLTPQMLVALGTEGIKTLEDFATCADWELAGGYTTV
DGKRVKDDGILETFDMSLEEAQTLVMSARLALGWVTEEDLAAQAEADAAPAAGDDTEEAA
GV
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgagctcgactgtcagcgccaacaggcttgaactgctccagatcgccgaagcggtcgca
cgcgagaagctgatcgaaccggaactcgtcatcgaggcgatggaagacagcctcggcaag
gccgcgcgctcgcgttacggcgccgagtacgacatccgcgcccatatcgaccgccgctcc
ggcgaactgtcgatgtcgcgggttcgcgaagtggtcgaggaggtggagaatcacttcacc
gagatgaccctcgaggaagcccgggcgaagaaccccgaggccgagatcggcgcgatcatc
gccgaccccctgcccacgctggacctgggccgcatcgcggcgcagtcggccaagcaggtc
atcgtgcagaaggtccgcgaggccgagcgcgagcgccagtacgacgaattcaaggaccgc
atcggcaccatcatcaacgggctggtcaagcgcgtggaatacggcaacgtcatcgtggac
gtgggccggggcgaggcgatcatccgccgcgaccagatgatcccgcgcgaggcctaccgc
aacggcgaccgcatccgcgcctatgtgaaggacgtgcgccaggaaacccgtggcccgcag
atcttcctcagccgcaccgcgccggagttcatggccgcgctgttcaagatggaagtgcct
gaaatctatgacaatgtcatcgagatcaaggccgtggcccgtgacccgggcagccgcgcc
aagatcggcgtgatctcctatgaccattcgatcgacccggtcggcgcctgcgtgggcatg
cgcggcagccgtgtgcaggccgtcgtggccgagcttcagggcgagaagatcgacatcatt
ccgtggacggaagacaccgcgaccttcctggtgaacgcgctgcagcccgccgaggtctcc
aaggtggtgatcgacgaggacagcgagcgcatcgaggtcgtggtgccggacgaccagctc
tcgctggccatcggccgccgcggccagaacgtgcgcctcgcctcccagctcaccggctgg
gacatcgacatcatgaccgaggccgaggagagcgagcgccgccaggccgagttcgccgtc
cgctccaagatgttcatggattcgatgaacgtggacgagatggtggcgcagcttctggtg
tccgaggggttcacatcgctcgaagaagtcgcatatgtcgagatggatgacctgctctcc
atcgacggcttcgacgaggagaccgccgaggagctgcaggcccgtgcccgcgagagcctc
gaagagctcaacaaccaggccaccgagaaggccagggagcttggcgtcgaggagagcctg
tttgcattcgagggcctgacaccccagatgttggtggcgctcggcaccgagggcatcaag
accctcgaggactttgccacctgcgcggactgggagctggccggcgggtataccaccgtc
gacggcaagcgcgtgaaggatgacggcatcctcgagacatttgacatgtccctggaagaa
gcgcagaccctcgtgatgtcggcccgcctcgcgcttggctgggtgaccgaggaagacctc
gccgcacaggccgaggcagatgcggcgcccgccgcgggcgatgacaccgaggaggcggcc
ggggtctga
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