Paroceanicella profunda: FDP22_04690
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Entry
FDP22_04690 CDS
T06319
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00521
Streptomycin biosynthesis
ppru00523
Polyketide sugar unit biosynthesis
ppru00525
Acarbose and validamycin biosynthesis
ppru00541
Biosynthesis of various nucleotide sugars
ppru01100
Metabolic pathways
ppru01110
Biosynthesis of secondary metabolites
ppru01250
Biosynthesis of nucleotide sugars
Module
ppru_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FDP22_04690 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FDP22_04690 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FDP22_04690 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FDP22_04690 (rfbB)
00525 Acarbose and validamycin biosynthesis
FDP22_04690 (rfbB)
Enzymes [BR:
ppru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FDP22_04690 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
QDL91139
UniProt:
A0A5B8FXA0
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All DBs
Position
complement(1035340..1036395)
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AA seq
351 aa
AA seq
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MKLLITGGCGFIGSAVVRLAIAEKHRVVNLDALTYAGSRSNVASCEDNPRYTFEHADIRD
RAALDRIFAEHQPEAVMHLAAESHVDRSIDGPGDFIETNVVGTYNMLEAARAYWTGLRGM
AKAAFRFHHISTDEVFGALGERGLFTETSPYQPNSPYSASKAGSDHLVRAWGETYGLPVL
LTNCSNNYGPFHFPEKLIPVVILNALAGRDIPVYGAGENVRDWLFVEDHAKALLTVVARG
TVGETYNIGGNAEARNIDLVRQICALIDEMRPGNEPRETLIRFVTDRPGHDYRYAIDASK
IRTELGWQPSVTLEEGLRRTVAWYLENTGWWQDIAARGAELRRLGLGASAG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttctgattaccggcggctgcggcttcatcggctcggcggtcgtgcggctggcg
attgccgagaagcaccgggtggtgaacctcgacgcgctcacctacgccggcagccgctcc
aacgtggcctcctgcgaggacaacccgcgctacacgttcgaacacgcggacatccgcgac
cgcgccgcgctggaccggatcttcgccgagcaccagcccgaggccgtgatgcacctcgcc
gccgagagccacgtggaccgctccatcgacgggccgggggatttcatcgagaccaacgtc
gtgggcacctacaacatgctggaggccgcccgcgcctactggaccgggctgcgcggcatg
gccaaggccgccttccgcttccaccacatctccaccgacgaggtgttcggcgcgctgggc
gaacgcgggctgttcaccgaaacctcgccctaccagccgaattcgccctattccgcctcc
aaggccgggtccgaccacctggtgcgcgcctggggcgagacctacggcctgccggtgctg
ctcacaaactgctcgaacaattacgggcccttccactttcccgagaagctcattcccgtg
gtcatcctgaatgcactggcggggcgggacatcccggtctacggtgcgggggagaacgtg
cgcgactggctcttcgtggaggatcatgcgaaagccctgctcacggtggtcgcgcgcggc
acggtcggcgagacctacaacatcggcggcaacgcggaagcccgcaacatcgacctcgtg
cggcagatctgcgccctgatcgacgagatgcgccccggcaacgaaccgcgcgagacactg
atccgcttcgtgacggaccggcccgggcacgactatcgctacgcgatcgacgcctcgaag
atccgcaccgagctgggctggcagccctcggtgaccctcgaggagggcctgcgccgcacg
gtggcctggtatctcgagaacaccggctggtggcaggacatcgccgcgcgcggcgcagag
ctccggcgcctcgggctcggcgcctcggccggttga
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