Paroceanicella profunda: FDP22_05330
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Entry
FDP22_05330 CDS
T06319
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDP22_05330
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_05330
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FDP22_05330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDL91252
UniProt:
A0A5B8FXL1
LinkDB
All DBs
Position
complement(1184801..1186390)
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AA seq
529 aa
AA seq
DB search
MNRREFNHLLFMSGAVAVSGAGLGRPAFAQAAEGGLTAIIQPEPPILQLALNQQTPTGVV
GGKIYESLLSYDLKLTPGPQLAESWEMSEDGLTYTFHLVRNAKWHDGAPFTAADVVFTCD
DFLKEVHPRARATFERCESITAPDDYTVVFKLKEPFAPFLLAFETSSAPMVPRHLYEGED
YRNSEHNQTPIGTGPFKFNEWVRGSHIHLQAFDEYYREGEPHLTEIYYRVIPDAASRSVA
LETGEAQLAQWGDVETFDVERLSALPHLTMTTQGYEFFSPVSWLEFNCRNKPMDDKRFRQ
AVMHLIDREFIRDRILFGLAKVATGPIASTTRFYDGDVKQYELSIEKATALLDEMGLTPG
SDGNRVTIDYPVPPYGETWVRTAEFIRQALAQGGINVNLISTDVAGWASSVSNWEFDITT
NMLYQFGDPALGVARTYVSSNIRKGVMFTNTAGYSNPEVDRLFAEAAVATSDDTRQALYS
EVQKLLVEEVPVAWLTENQFPTIYDNRLEDLIVSATGVNANFASARYAG
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgccgcgaattcaatcacctgctgttcatgtccggcgcggttgccgtcagcggg
gccggtcttggccgccccgccttcgcccaggccgccgagggcgggctcaccgccatcatc
cagccggagccgccgatcctgcagcttgccctcaaccagcagacccccaccggcgtggtg
ggcggcaagatctacgagagcctgctgagctacgacctgaagctgacccccggcccgcag
ctggccgagagctgggagatgtccgaggacgggctcacctacaccttccacctggtgcgg
aacgccaagtggcatgacggcgcgcccttcaccgccgccgatgtggtgttcacctgcgac
gatttcctgaaggaagtgcacccgcgcgcccgtgccaccttcgagcgctgcgagagcatc
accgcgccggacgactacaccgtggtgttcaagctgaaggagccgttcgcgcccttcctg
ctggccttcgagacctcctccgccccgatggtgcccaggcacctctacgagggcgaggac
taccgcaactccgagcacaaccagacgcccatcggcaccggcccgttcaagttcaacgaa
tgggtgcgcggcagccacatccacctgcaggccttcgacgagtattaccgcgagggcgag
ccgcatctcaccgagatctactaccgggtgatcccggacgccgcctcccgctccgtggcg
ctggagaccggcgaggcccagctcgcccagtggggcgacgtggagaccttcgacgtggag
cgcctctccgccctgccgcacctgacgatgaccacccagggctacgagttcttctccccc
gtctcctggctggaattcaactgccgcaacaagccgatggacgacaagcgcttccgccag
gcggtgatgcacctgatcgaccgcgagttcatccgcgaccgcatcctcttcggcctcgcc
aaggtggcgaccgggcccatcgcctccaccacccgtttctacgacggcgacgtgaagcag
tatgaactctccatcgagaaggccacggccctgctcgacgagatgggcctcacccccggt
tccgacggcaaccgcgtgaccattgactaccccgtcccgccctatggcgagacctgggtg
cgcacggcggagttcatccgccaggcgttggcgcagggcggcatcaacgtgaacctgatc
tccacggacgtggccggctgggcctcctccgtgtcgaactgggagttcgacatcaccacc
aacatgctctaccagttcggtgacccggcgctgggcgttgcccgcacctatgtctcgtcc
aacatccgcaagggcgtcatgttcaccaacaccgccggctactccaaccccgaggtcgac
cggctgttcgccgaggccgcggtggcgacctccgacgacacgcgccaggctctctactcc
gaggtgcagaagctgctcgtggaggaagtgccggtggcctggctgaccgagaaccagttc
ccgacgatctacgacaaccggctggaagacctgatcgtctcggccaccggggtgaatgcc
aacttcgcctctgccagatacgcgggataa
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