KEGG   Paroceanicella profunda: FDP22_06550
Entry
FDP22_06550       CDS       T06319                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ppru  Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:ppru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppru03400]
    FDP22_06550
Enzymes [BR:ppru01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FDP22_06550
    5.6.2.6  RNA 3'-5' helicase
     FDP22_06550
DNA repair and recombination proteins [BR:ppru03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FDP22_06550
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: QDL93614
UniProt: A0A5B8G0P8
LinkDB
Position
complement(1451377..1453776)
AA seq 799 aa
MVPGYVEDWFAARGWSPHPHQRAVLAEHGPAALLIAPTGGGKTLAGFLPSLIDLGPAPAP
GLHTLYVSPLKALAADIRRNLAVPVAEMGLAIRIEDRTGDTRPSARQRQRRDPPHILLTT
PESLALMLSYEDAPRLFAGVRRVIVDEIHALAESKRGDQLMLGLARLERLAPGLRRLGLS
ATVEDPEALGRFLHPAGCALLLADPGPDPDIGMLATAAPPPWSGQGGRHAAADVMAEIAK
ARVTLVFINTRAQAELFFRALWAVNTQNLPIGLHHGSLAREVRERIEAAMAAGALRAVVS
TGSLDLGIDWGDVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSRALIVPANRLELLECQA
ALDAVRERDLDGDPRPPGPLDLLCQHILLCACAAPFAADDLFAEVRTAGPYAGLSRERFD
RCLAFCATGGYALRAYDRWQRLMLRDGLWQLRDPRRARDLRMNIGTITAAETLKVRKRGG
APLGEVDEMFAASLTPGNRFLIGGQVVRYEGLRDMVVEVSPARGAEPMIAVYGGTKLAMS
TRLAHRVLALLEDRARWPALPGHIGDWLDRQARVSRLPSAERLLAETFGRDGRQYLCLHG
FAGRNAHQTLGLLLTRRMEEAGLEPLGFVASDASLMIWGLREVADPAALLAPGALRDGLE
GWLADNAVMKRTFRSAALIAGLIDRTLPGKRRTGRQATFSSDILYDTLRRYDPGHLMLDI
TREEALRGLVDFDRIEEMLARTRGRVDHVRAPHVTPLAAPLLLEIGKVPIHGAAEARLLE
EAAEALMAEAGDLPAPATD
NT seq 2400 nt   +upstreamnt  +downstreamnt
atggtgcccggatatgtcgaggactggtttgccgcccgtggctggagcccgcatccgcat
cagcgcgcggtgctggcggagcatgggccggcggcactgctcatcgcgcccaccggcggc
gggaagacactggccggcttcctgccctcgctgatcgacctggggcccgcgccggcgccc
gggctgcacacgctctacgtctcgccgctgaaggcgctcgcggcagatatccggcgcaac
ctcgccgtgccggtggcggagatgggcctcgccatccgcatcgaggaccggacgggcgac
acccgcccctccgcccgccagcgccagcgccgcgacccgccgcacatcctgctcaccacg
ccggagagcctcgcgctcatgctttcctacgaggacgcgccgcgcctcttcgccggggtg
cgcagggtgatcgtggacgagatccacgccctcgccgagagcaagcgcggcgaccagctg
atgctcggcctcgcccggctggagcggctggcgccggggctgcgccggctcggcctgtcc
gccacggtggaggaccccgaggcgctcggccgcttcctccaccccgccggctgcgccctg
ctgctggcggatccggggccggatccggacatcggcatgctggccacggccgccccgccg
ccatggtccgggcagggcgggcgccacgcggcggcggacgtgatggccgagatcgcgaag
gcgcgggtcaccctcgtcttcatcaacacccgggcgcaggcggagctgttcttccgcgcg
ctctgggcggtgaacacgcagaacctgccgatcgggctgcaccacggctcgctggcgcgc
gaggtgcgcgagcgcatcgaggcggcgatggccgccggtgccctgcgggccgtggtctcc
accgggtcgctcgacctcgggatcgactggggcgacgtggacctggtgatccaggtgggc
gcgccgaagaacgtgaagcgcctcgtgcagcgcatcggccgggcgaaccatcgctacaac
gccccctcccgggcgctgatcgtgccggcgaaccggctggaactgctggagtgccaggcg
gcgctggacgcggtgcgcgagcgcgacctcgacggagacccgcgcccgcccggcccgctc
gacctgctgtgccagcacatcctgctctgcgcctgcgcggccccgttcgccgcggacgac
ctcttcgccgaggtgcgcaccgccggcccctatgccgggctgagccgggagcgcttcgac
cgctgcctcgcgttctgcgccaccggcggctacgccctgcgcgcctatgaccgctggcag
cggctgatgctgcgcgacgggctgtggcagctgcgcgacccgcgccgcgcccgcgacctg
cgcatgaacatcggcaccatcaccgccgcggaaaccctgaaggtccgcaagcgcggcggc
gcgccgctgggcgaggtggacgagatgttcgccgcctccctcacccccggaaaccgcttc
ctgatcggcggccaggttgtgcgctacgagggcctgcgcgacatggtggtggaggtgagc
ccggcgcgcggggcggaaccgatgatcgccgtctacggcggcacgaagctggcgatgtcc
acccggctggcccaccgggtgctcgccctgctggaggaccgcgcccgctggcccgccctg
cccggtcacatcggcgactggctggaccgccaggcgcgggtgagccgcctgccctccgcc
gagcggctgctggcggagaccttcggccgcgacggccgccagtacctctgcctgcacggt
ttcgccgggcgcaacgcgcaccagaccctgggactgctgctcacccggcgcatggaggag
gccgggctggagccgctgggcttcgtggcctcggacgcctcgctgatgatctggggcctg
cgggaggtggcggaccccgccgccctgctcgcccccggcgcgctgcgcgacgggctggag
ggctggctggccgacaacgcggtgatgaagcgcaccttccgctccgccgcgctcatcgcc
gggctgatcgaccgcaccctgcccggcaagcgccgcaccggccgccaggccaccttctcc
tccgacatcctctacgacacgctgcgccgctacgaccccggccacctgatgctggacatc
acccgcgaggaggccctgcgcggcctggtggatttcgaccgcatcgaggagatgctggcc
cgcacaaggggccgcgtcgaccatgtccgcgcgccccatgtcaccccgctcgccgccccg
ctgctgctggagatcggcaaggtgccgatccacggcgccgccgaggcccgcctgctggaa
gaggccgccgaggcgctgatggccgaagccggagacctccccgccccggcgaccgattga

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