Paroceanicella profunda: FDP22_07050
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Entry
FDP22_07050 CDS
T06319
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppru03032
]
FDP22_07050
03036 Chromosome and associated proteins [BR:
ppru03036
]
FDP22_07050
03400 DNA repair and recombination proteins [BR:
ppru03400
]
FDP22_07050
DNA replication proteins [BR:
ppru03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FDP22_07050
Chromosome and associated proteins [BR:
ppru03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FDP22_07050
DNA repair and recombination proteins [BR:
ppru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FDP22_07050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QDL91562
UniProt:
A0A5B8FYE7
LinkDB
All DBs
Position
1572684..1572920
Genome browser
AA seq
78 aa
AA seq
DB search
MTLKELADRVSAESGVTPRDAQRALRGFFSVLDTEIEASEVVFLPGFGRLMKRQTADGKE
RIVLVRRKAAGAEAEDPA
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgacactgaaggagctcgccgatcgcgtcagcgccgaaagcggcgtcacgccccgtgac
gcacagcgtgccctgcgcggcttcttctcggtgctcgacaccgagatcgaggcatccgaa
gtggtgttcctgcccgggttcggccggctgatgaagcgccagaccgccgatggcaaggaa
cgcatcgtcctcgtgcgccgcaaggccgccggcgccgaggcggaggatcccgcgtga
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integrated database retrieval system
