Paroceanicella profunda: FDP22_07200
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Entry
FDP22_07200 CDS
T06319
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppru03016
]
FDP22_07200 (miaB)
Enzymes [BR:
ppru01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
FDP22_07200 (miaB)
Transfer RNA biogenesis [BR:
ppru03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
FDP22_07200 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QDL91591
UniProt:
A0A5B8FGS8
LinkDB
All DBs
Position
complement(1602230..1603549)
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AA seq
439 aa
AA seq
DB search
MTAPKKLFVKTYGCQMNVYDSERMAAAMGADGYESTDRAEDADMILLNTCHIREKAAEKV
YSELGRLRPLKTAKPGLKIGVAGCVAQAEGEEIMRRQPLVDLVVGPQAYHRLPAMARRVD
AGEKALDTEFPEEDKFEHLPRGPKARRAPAAFLTVQEGCDKFCAFCVVPYTRGAEVSRPA
ERILAEARDLVERGVREITLLGQNVNAYHGAAEGGPWTLARLIRALAEIDGLDRIRFTTS
HPNDMDDDLIAAHGEVEKLMPYLHLPVQAGSDKVLKAMNRKHTAESYLRLIERIRAARPD
IAMSGDFIVGFPGETEADFQDTLALCREVRYAQAYSFRYSARPGTPAAGRTLVPEAEAAD
RLARLQALLSEHQAEFQASMVGRRLPVLLEKPGREPGQLVGRSPYLQSVFLEAPEALTGE
IVTAEILKAAPNSLAGRLV
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgctccgaagaaacttttcgtgaagacctacggctgtcagatgaatgtctacgac
agcgagcgcatggcagcggccatgggtgccgacgggtatgaaagcacggaccgggcggaa
gacgccgacatgatcctgctcaacacctgccacatccgcgagaaggctgccgagaaggtc
tattcggaactcggtcgcctgcgccccctcaagaccgcgaagcccgggctgaagatcggc
gttgccggctgcgtggcccaggccgagggcgaggagatcatgcgccgccagccgctggtc
gacctcgtggtgggcccgcaggcctatcaccgcctgccggccatggcccgccgggtggac
gccggggagaaggcgctcgacaccgagttccccgaggaagacaagttcgagcacctgccg
cgcggcccgaaggcccggcgggcgccggccgccttcctcaccgtgcaggagggctgcgac
aagttctgcgccttctgcgtggtgccctacacccgcggcgccgaggtctcgcgcccggcg
gagcgcatcctcgcggaggcccgcgatctggtggagcgcggcgtgcgcgagatcaccctg
ctcggccagaacgtgaacgcctatcacggcgcggcggagggcggcccctggacgctcgcc
cggctgatccgcgcgctggcggagatcgacgggctggaccgcatccgcttcaccacctcc
caccccaacgacatggacgacgacctcatcgccgcccatggcgaggtggagaagctcatg
ccctacctgcacctgcccgtgcaggccggctcggacaaggtgctgaaggcgatgaaccgc
aagcacaccgcggaaagttacctgcggctgatcgagcgcatccgcgccgcccgccccgac
atcgccatgtccggggacttcatcgtcggcttccccggcgagaccgaggcggatttccag
gacacgctcgcgctgtgccgcgaggtgcgctacgcgcaggcctattccttccgctactcc
gcgcgcccgggcacgccggccgcgggccgcaccctggtgccggaggcggaggccgcggac
cgtctcgcccgcctgcaggcgctgctctcggagcatcaggcggagttccaggcctccatg
gtgggccggcggctgccggttctgctggagaagccggggcgcgagccgggacagcttgtg
gggcgctcgccctacctgcagtcggtattcctggaagcgccggaggcgctcaccggcgag
atcgtcaccgccgagatcctgaaggccgcgccgaattcgctggccggccggctggtgtga
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