Paroceanicella profunda: FDP22_07320
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Entry
FDP22_07320 CDS
T06319
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppru03021
]
FDP22_07320
Transcription machinery [BR:
ppru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FDP22_07320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
KORA
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QDL91615
UniProt:
A0A5B8FTE1
LinkDB
All DBs
Position
complement(1627353..1628234)
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AA seq
293 aa
AA seq
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MALDHAFGERTPAPVARRAMRAEMLDAETELELARRWRDEQDEAALHRLVNAYVRLAISM
AAKYRRYGGSMNDLTQEAIVGLMKAAAKFDPDRGVRFSTYAVWWIKASIQDYVMRNWSLV
RTGSTSSQKALFFNLRRIRAKLEREGAQDGASMREQIATTIGVPLRDVEMMEARLSGSDF
SLNALQAGEEGREWVETLEDEGPQASEIVGRRADNDRMRGWLSEAFKTLTERERLIIAAR
KLADEPRTLDSLGVELGLSKERVRQLEAQALRKLRKSLEARTGNAAQQFVVAA
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggccctagatcacgcctttggcgagcgaaccccggcaccggtggccagacgagccatg
cgggccgaaatgctcgacgcggagaccgagcttgaactggcccggcgctggcgtgacgaa
caggatgaggcagcccttcaccgcctggtgaacgcttatgtccgcctcgccatctccatg
gccgcgaaataccgccgctacggcggctcgatgaacgacctcacccaggaagccatcgtg
ggcctgatgaaggcggcggcgaagttcgaccccgaccggggcgtgcgcttctccacctac
gccgtgtggtggatcaaggcctccatccaggattacgtgatgcggaactggtcgctggtg
cgcaccgggtccacctcctcccagaaggcgctgttcttcaacctccgccgcatccgcgcc
aagctggagcgcgaaggcgcacaggacggggccagcatgcgcgagcagatcgccaccacc
atcggggttccgctgcgcgacgtggagatgatggaggcccggctctcgggttccgacttc
tcgctcaatgcgctgcaggccggcgaagagggccgcgaatgggtggaaacgcttgaggac
gagggtccgcaggcctccgagatcgtcggccgccgcgccgacaacgaccggatgcgcggc
tggctctccgaagccttcaagaccctcaccgagcgtgagcgcctgatcatcgccgcccgc
aagctggccgacgaaccccgcaccctcgacagtctcggcgtggagctgggcctctccaag
gagcgcgtgcgccagcttgaggcgcaggcgctgcgcaagctgcgcaagagcctcgaagcg
cgcaccggcaacgcggcgcagcagttcgtcgtcgcggcctga
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