Paroceanicella profunda: FDP22_07545
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Entry
FDP22_07545 CDS
T06319
Name
(GenBank) substrate-binding domain-containing protein
KO
K10439
ribose transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02010
ABC transporters
ppru02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FDP22_07545
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
FDP22_07545
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_07545
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
FDP22_07545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Peripla_BP_1
TPP_enzyme_C
PucR
Motif
Other DBs
NCBI-ProteinID:
QDL91653
UniProt:
A0A5B8FZG8
LinkDB
All DBs
Position
1679212..1680156
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AA seq
314 aa
AA seq
DB search
MKKTLAPALVAGLLAGAAAVSAQAGEIAVIVKTTSSNFWQNVNKGAQAAIEGQSEHTLSF
DGPASESAIADQVNLVENAINRGVSGIVLAPSDPEALAPAVKRAYENAIPVVIIDSALAD
SAQGTYQAFLATDNCAAGEEVAKMMIDEVGTEGKVAIMSYVAGVGSEIGRVGCFTDYIRA
NSKLDIVGPYYSQSQMALALNQTTDVLAANGDLKGIFGANEPTAVGMGRALVQSGKAGEI
AAIGFDGNGDLQQFVRDGTLKATAVQGSFQMGEEGVKTVMEILAGNKVAPKIDTGVVLVT
PDNIDDPVAQNVLY
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaccctcgcaccggcgctcgtcgccgggctccttgccggggcggcggccgtt
tccgcccaggccggcgagatcgccgtgatcgtgaagaccaccagctccaacttctggcag
aacgtgaacaagggcgcgcaggccgccatcgaggggcagagcgagcacacgctcagcttc
gacggcccggcctccgaatccgccatcgccgaccaggtgaacctggtggagaacgccatc
aaccgcggcgtctccggcatcgtgctcgccccgtcggaccccgaggcgctggcccccgcc
gtgaagcgcgcctacgagaacgcgatcccggtggtgatcatcgattccgccctcgccgac
agcgcgcagggcacctatcaggccttcctggccaccgacaattgcgccgcgggcgaggag
gtggcgaagatgatgatcgacgaggtcggcaccgagggaaaggtggcgatcatgtcctac
gtggccggcgtgggttcggagatcggccgggtgggctgcttcaccgactacatccgggcg
aactcgaagctcgacatcgtcggcccgtactactcgcagtcgcagatggcgctggcgctg
aaccagaccaccgacgttctggccgcgaacggtgacctgaagggcatcttcggcgccaac
gagcccaccgccgtgggcatgggccgggcgctggtgcagtccggcaaggccggcgagatc
gccgccatcggctttgacggcaacggcgacctgcagcagttcgtgcgcgacggcacgctg
aaggccaccgccgtgcagggctcgttccagatgggcgaggagggggtgaagaccgtgatg
gagatcctcgccggcaacaaggtggcgccgaagatcgacaccggcgtggtgctggtgacg
cccgacaacatcgacgaccccgtggcgcagaacgtcctctactga
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