Paroceanicella profunda: FDP22_07850
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Entry
FDP22_07850 CDS
T06319
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppru03000
]
FDP22_07850
Transcription factors [BR:
ppru03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FDP22_07850
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
Motif
Other DBs
NCBI-ProteinID:
QDL91703
UniProt:
A0A5B8FZL0
LinkDB
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Position
1743590..1744537
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AA seq
315 aa
AA seq
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MRRKWTGLSGRLSDTDLRLLRVFLIVVEQEGLAASEVALDKSVSAISLDISKLEKRLGAT
LCRRGKGGFALTEEGRIVYNAALQLFTDIDRFRDRIGSAARSMAGRITLALIDNLVTVAE
APLVRALGEFRRDWPNVVPVLESASAQGVVQAVLRGTAEIGISVLPRTVESLDTIPLFRE
TLLLYCGPGHPLFGRAAEAGLEEVQSHRLIWPSVRDDPAFDEVLSRFPPGARSDNLDGRA
LLLLSGGDLGFLPPDFAAPWVARGALRAVRPDAIFTENTFRLVTRRSGERSTAAEAMMTE
LLGAFRAADRDVLSV
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcaagtggacgggcctctccggccggctctcggacaccgacctgcgcctgctc
agggtgttcctcatcgtggtggaacaggaggggctcgcggcctccgaagtggcgctggac
aagagcgtctcggccatttccctcgacatttcaaagctggagaagcgcctcggcgccacg
ctctgccggcgcggcaagggcgggttcgcgctcaccgaggaggggcgcatcgtctacaat
gccgccctgcagctcttcaccgacatcgaccgcttccgtgaccggatcggctccgccgcg
cgcagcatggccgggcgcatcaccctggcgctgatcgacaatctcgtcaccgtggccgag
gcgccgctggtccgcgcgctgggggagttccggcgcgactggccgaatgtcgtgcccgtt
ctggagagtgcgagcgctcagggcgtggtgcaggcggtgctgcggggaaccgcggagatc
ggcatttccgtgctgcctcgcacggtggagagcctcgacaccatcccgctgtttcgcgag
acgctgctgctctattgcggccccgggcatccgctgttcggccgcgcggccgaggccggg
ctggaggaggtgcagtcgcaccggctgatctggcccagcgtgcgcgacgacccggccttc
gacgaggtgctgtcgcgctttccgcccggcgcgcgctccgacaatctcgacgggcgcgcc
ctgctgctgctctccggcggggacctgggcttcctgccgccggatttcgccgcgccctgg
gtggcgcgcggggccctgcgggcggtgcgcccggacgcgatcttcaccgagaacaccttc
cggctggtgacccgccgcagcggggagcgcagcacggcggcggaggcgatgatgaccgaa
ctgctcggcgccttccgcgcggcggaccgcgacgtgctctccgtatga
DBGET
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