Paroceanicella profunda: FDP22_08885
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Entry
FDP22_08885 CDS
T06319
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ppru
Paroceanicella profunda
Pathway
ppru02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FDP22_08885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppru02000
]
FDP22_08885
Transporters [BR:
ppru02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
FDP22_08885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QDL91879
UniProt:
A0A5B8FYW9
LinkDB
All DBs
Position
complement(1993123..1994781)
Genome browser
AA seq
552 aa
AA seq
DB search
MHLTRRTLGLALAASLMASTLLSSPILAQDRPHITVAVQQIVNAGALDVLREQSNVGARV
FYSLFETLIDYDRQLPDLPRKPGLATSWKRIDDRTVELTLRQGVKFHNGDTMTADDVVFT
FSPERFGTLPEQIEAQKSGAQLFTSTVAQITNGKVPPPEVAAVARRAWPNLDRVEKVDDM
TVRFISEVPDPTLEGRISRYGAEILSKRAYEEAPTWADYARHPVGTGPYKVVEFKPDNVL
VLAAHDDYWGGKPPIAELRFVVVPEVASRVNGLLSGEYDFITDVPPDQIALIDDEPKFDV
VGGPITNHRLMVFDKNNGPMKDVKVRQAMTHAIDRDSIVEALWGNRTKVPAGLQWEYYGD
MYLSDWKVPEYDMDLARKLVKDSSYNGEPIIMRVLNNYYTNQVSTAQINAESFRQIGLNV
QIEMKENWQQIFDTESGPRMVRDWSNSAPFPDPVASIVNQHCQNGQQQQVGEWTNEEFNA
LCIRLETSTDLETRRAAFRRMLEIAEREDPAYTVLHQNAIFYGKRADIAWEPSALQSMDF
RADNFAIVKPAN
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcacctcacccgccgcaccctcggcctcgcccttgccgcgagcctcatggccagcacg
ctgctgagctcccccatccttgcgcaggaccgcccgcacatcaccgtcgcggtccagcag
atcgtgaatgccggcgccctggacgttctgcgcgagcagtccaacgtcggcgcccgcgtg
ttctactcgctgttcgagacgctgatcgactatgaccgccagctgccggacctgccgcgc
aagcccggcctcgccacctcctggaagcgcatcgacgaccggacggtcgagctcaccctg
cgccagggcgtgaagttccacaacggcgacacgatgaccgccgacgacgtggtgttcacc
ttctcgccggagcgcttcggcaccctgcccgagcagatcgaggcccagaaatccggcgcg
cagctgttcacctccaccgtcgcgcagatcaccaacggcaaggtgccgccgccggaagtg
gccgccgtggcccgccgcgcctggccgaacctcgaccgggtggagaaggtggacgacatg
accgtgcgcttcatctccgaagtgccggaccccacgctggagggccgcatctcgcgctac
ggcgccgagatcctctcgaaacgcgcctatgaggaagccccgacctgggccgattacgcc
cgccacccggtcggcaccggcccctacaaggtggtggagttcaagcccgacaacgtgctc
gtgctcgccgcgcatgacgactactggggcgggaagccgccgatcgcggagctgcgcttc
gtggtggtgccggaggtggcgagccgggtgaacggcctgctctcgggcgagtatgacttc
atcaccgacgtgccgccggaccagatcgccctcatcgacgacgagccgaagttcgacgtg
gtcggcggcccgatcaccaaccaccgcctgatggtgttcgacaagaacaacggcccgatg
aaggacgtgaaggttcgccaggcgatgacccacgccatcgaccgggactccatcgtcgag
gcgctctggggcaaccgcaccaaggtgccggccggcctgcagtgggaatactacggcgac
atgtacctgtcggactggaaagtgcccgagtacgacatggacctggcccgcaagctggtg
aaggactccagctacaacggcgagccgatcatcatgcgcgtgctcaacaactactacacc
aaccaggtgtccaccgcgcagatcaacgccgaatccttccgccagatcggcctcaacgtg
cagatcgagatgaaggagaactggcagcagatcttcgacaccgagagcgggccgcgcatg
gtgcgcgactggtcgaactccgcgcccttcccggacccggtggcctccatcgtcaaccag
cactgccagaacggccagcagcagcaggtcggcgaatggacgaacgaggagttcaacgcg
ctctgcatccggctcgagacctcgaccgacctcgaaacccgccgggccgccttccgccgg
atgctcgagatcgccgagcgcgaggaccccgcctacacggtgctgcaccagaacgcgatc
ttctacggcaagcgggccgacatcgcctgggagccctccgcgctgcagtcgatggacttc
cgggccgacaatttcgccatcgtgaagcccgcgaactga
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