Paroceanicella profunda: FDP22_09935
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Entry
FDP22_09935 CDS
T06319
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FDP22_09935 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppru03400
]
FDP22_09935 (ruvB)
Enzymes [BR:
ppru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FDP22_09935 (ruvB)
DNA repair and recombination proteins [BR:
ppru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FDP22_09935 (ruvB)
RecFOR pathway proteins
FDP22_09935 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_22
Rad17
AAA_24
AAA_16
AAA_14
RNA_helicase
AAA_17
Bac_DnaA
TsaE
AAA_18
DUF815
nSTAND3
AAA_3
Parvo_NS1
AAA_28
AAA_33
ABC_tran
AAA_25
NB-ARC
PEPCK_ATP
Motif
Other DBs
NCBI-ProteinID:
QDL92065
UniProt:
A0A5B8FUK5
LinkDB
All DBs
Position
2216280..2217323
Genome browser
AA seq
347 aa
AA seq
DB search
MAASEAPDPLIRPDARPEDSDRALRPQTLDDFVGQKEARANLRVFIESARQRGQAMDHTL
FYGPPGLGKTTLAQIMSRELGVNFRMTSGPVLAKAGDLAAILTNLDTRDVLFIDEIHRLN
PVVEEVLYPALEDFALDLVIGEGPAARTVRIDLPPFTLVGATTRLGLLTTPLRDRFGIPT
RLEFYTVEELELIVTRAARLLGAEADAAGAREIARRARGTPRIAGRLLRRVVDFAVVEGD
GRVTRALADMALHRLGVDDLGLDGADRRYLGMLAENFGGGPVGVETMAAALSESRDAIEE
VIEPFLLQQGLLQRTPRGRMLGRRAWTHLGLTPPRQPPQASLFGDDA
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggctgcatccgaggcccccgatccgctgatccgccccgacgcccggcccgaggattcg
gaccgcgccctgcggccgcagaccctggacgatttcgtcggccagaaggaggcccgcgcc
aacctgcgcgtgttcatcgagagcgcgcgccagcgcggccaggccatggaccacacgctg
ttctacgggccccccggcctcggcaagaccacgctggcgcagatcatgtcgcgcgagctg
ggggtgaacttccgcatgacctcgggcccggtgctggcgaaggcgggcgaccttgccgcc
atcctcaccaatctcgacacccgcgacgtgctgttcatcgacgagatccaccgcctgaac
ccggtggtggaggaggtgctctacccggcgctggaggatttcgctctcgacctcgtgatc
ggcgaggggccggcggcgcgcaccgtgcgcatcgacctgccgcccttcaccttggtgggc
gccaccacccggctgggcctgctcaccacgccgctgcgcgaccgcttcggcatccccacc
cggctggagttctacaccgtggaggagctggaactcatcgtcacccgcgccgcgcgcctg
ctgggggccgaggccgatgcggccggcgcccgcgagatcgcccgccgcgcccgcggcacg
ccgcgcatcgccgggcggctgctgcgccgggtggtggacttcgccgtggtcgagggcgac
ggccgcgtcacccgcgcgctcgccgacatggcgctgcaccggctcggggtcgacgacctc
gggctcgacggggccgaccggcgctacctcggcatgctggcggagaatttcggcggcggg
ccggtgggggtggagaccatggccgccgcgctgtcggagagccgcgacgcgatcgaggag
gtgatcgagcccttcctcctccagcaggggctgctgcagcgcacgccgcgcgggcgcatg
ctgggccgccgggcctggacgcacctcggcctcacgccgccgcgtcagcctccgcaggcg
agcctgttcggagacgatgcgtga
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