Paroceanicella profunda: FDP22_10440
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Entry
FDP22_10440 CDS
T06319
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00300
Lysine biosynthesis
ppru00470
D-Amino acid metabolism
ppru01100
Metabolic pathways
ppru01110
Biosynthesis of secondary metabolites
ppru01120
Microbial metabolism in diverse environments
ppru01230
Biosynthesis of amino acids
Module
ppru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FDP22_10440 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FDP22_10440 (lysA)
Enzymes [BR:
ppru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FDP22_10440 (lysA)
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QDL92154
UniProt:
A0A5B8FX46
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All DBs
Position
2333050..2334318
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AA seq
422 aa
AA seq
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MDHFTYRNGILHAEDVALPEIAAAVGTPFYVYSSATLTRHYRVFEEALAGMDHLICYAMK
ANSNLAVLKLLGDLGAGMDVVSGGEIARAQAAGVPGSRIVFSGVGKTRAEIAQALSIGIR
QFNVESEPELEAISEIATAMGTSAPIAIRVNPDVDAKTHAKIATGKSENKFGIPITRAPE
VYARAATLPGIEVIGIDVHIGSQLTELAPYEAAFTKVADLTRTLRAAGHDIRRLDLGGGL
GIPYTRTNEAPPLPFDYGEVVRRTVGDLGCQIEIEPGRLIAGNAGLLVSEVLYVKEGEGR
RFLILDAAMNDLIRPAMYDAHHDVLPVVEAAPGIAPEPADIVGPVCESGDTFAKGRAMPP
LAAGALVAFRSAGAYGAVMASEYNSRPLVPEVLVRNDHFDVVRARPSIEEMLSRDTIPSW
MG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggaccatttcacttaccgcaacggcatcctgcatgccgaggatgtcgccctgccggag
atcgcggcggcggtcggcacgccgttctacgtctactccagcgccacgctcacccgccac
taccgggtgttcgaggaggcgctggcgggcatggaccacctgatctgctacgcgatgaag
gcgaattccaacctcgcggtgctcaagctgctgggcgacctcggcgcgggcatggacgtg
gtctcggggggcgagatcgcccgggcgcaggccgcgggcgttccgggcagccgcatcgtc
ttctccggcgtgggcaagacccgggccgagattgcccaggcgctgagcatcggcatccgc
cagttcaacgtggagagcgagccggagctggaggcgatctccgagatcgccaccgccatg
ggcaccagcgcgccgatcgccatccgggtgaacccggacgtggacgcgaagacccacgcg
aagatcgccaccggcaagtccgagaacaagttcggcatcccgatcacccgcgcgccggag
gtctatgcccgcgccgccacgctgccggggatcgaggtgatcggcatcgatgtgcacatc
ggctcgcagctcaccgaactcgccccctacgaggccgccttcaccaaggtggccgacctc
acccgcaccctgcgcgccgccggccacgacatccgccggctggacctgggcggcgggctc
ggcatcccctacacccgcaccaacgaggctccgccgctgcccttcgactacggcgaggtg
gtgcgccgcaccgtgggagacctgggctgccagatcgagatcgagccgggccggctgatc
gccgggaatgccgggctgctggtctccgaggtgctctacgtgaaagagggcgaggggcgg
cgcttcctgatcctcgacgcggcgatgaacgacctcatccgcccggcgatgtatgacgcc
catcacgacgtgctgccggtggtcgaggccgcaccgggtatcgccccggaacccgccgat
atcgtgggcccggtctgcgaaagcggcgacacgttcgcgaagggcagggcgatgccgccg
ctcgcggccggggcgctggtcgccttccgctccgccggcgcctatggcgcggtgatggcc
tcggaatacaactcccgcccgctggtgccggaagttctcgtcaggaacgatcactttgac
gtggtcagggcacgtccgtccattgaggaaatgctttcccgcgatacgataccttcgtgg
atgggctga
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