Paroceanicella profunda: FDP22_10570
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Entry
FDP22_10570 CDS
T06319
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppru03019
]
FDP22_10570 (rnc)
03009 Ribosome biogenesis [BR:
ppru03009
]
FDP22_10570 (rnc)
03036 Chromosome and associated proteins [BR:
ppru03036
]
FDP22_10570 (rnc)
Enzymes [BR:
ppru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FDP22_10570 (rnc)
Messenger RNA biogenesis [BR:
ppru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FDP22_10570 (rnc)
Ribosome biogenesis [BR:
ppru03009
]
Eukaryotic type
90S particles
RNase
FDP22_10570 (rnc)
Prokaryotic type
rRNA processing factors
FDP22_10570 (rnc)
Chromosome and associated proteins [BR:
ppru03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FDP22_10570 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Orthopox_F8
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QDL92179
UniProt:
A0A5B8FZI1
LinkDB
All DBs
Position
2361066..2361758
Genome browser
AA seq
230 aa
AA seq
DB search
MAARSEVLARVEARIGHVFSRSDLLDEALTHASFSTNVRPDNQRLEFLGDRVLGLVIAEA
LLVQDPGAAEGVLAPRLNALVRKETCAEVAVDLDLGAAIVMGRSEMLSGGRRKQAILGDA
MESVIAAVYLDAGLDVARAFILRAWAGRVETAEARAADAKSALQEWAQGRGQEPPDYREI
ARSGPPHAPIFTIEVRLASGESAVAQARSKRAAQQSAAAQLLKSLETGDE
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgcgcagcgaggtgctggcccgcgtcgaggcgcggatcgggcatgtgttctcc
cgctccgacctgctcgacgaggcgctcacccatgcctccttctccaccaacgtgcggccg
gacaaccagcggctggagttcctgggagaccgggtgctcgggctggtgatcgccgaggcg
ttgctggtgcaggacccgggcgcggccgagggcgttctggcaccgcgcctcaacgcgctg
gtgcgcaaggagacctgcgcggaggttgcggtggacctcgatctcggcgccgccatcgtg
atgggccgctcggagatgctctcgggcgggcggcgcaagcaggccatcctgggcgacgcc
atggaatcggtgatcgcggcagtgtatcttgacgccgggctcgacgtggcgcgcgccttc
atcctgcgggcctgggccggccgggtggagaccgcggaggcgcgggccgcggatgcgaag
agcgccttgcaggaatgggcacagggccgcggccaggagccgccggattatcgcgaaatc
gcgcgcagcgggccgccgcacgcgccgatcttcaccatcgaggtgcggctggccagcggt
gagagcgccgttgcccaggcccgatcgaaacgtgcggcacagcaatcggcggcggcacag
ctgctcaagtcactggagaccggagatgagtga
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