Paroceanicella profunda: FDP22_11570
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Entry
FDP22_11570 CDS
T06319
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
ppru
Paroceanicella profunda
Pathway
ppru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FDP22_11570 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppru03400
]
FDP22_11570 (uvrB)
DNA repair and recombination proteins [BR:
ppru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FDP22_11570 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FDP22_11570 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
DUF87
AAA_19
AAA_16
AAA_22
UB2H
AAA_5
TrwB_AAD_bind
Kinesin
eIF3_p135
Motif
Other DBs
NCBI-ProteinID:
QDL92357
UniProt:
A0A5B8FHN1
LinkDB
All DBs
Position
complement(2589055..2591229)
Genome browser
AA seq
724 aa
AA seq
DB search
MLIDALTTVPQDPQRHKTEGGKRIVMESPFQPAGDQPTAIAELVAGVQSGERDQVLLGAT
GTGKTFTMAKIIEATQRPAIILAPNKTLAAQLYGEFKNFFPYNAVEYFVSYYDYYQPEAY
VARTDTFIEKESQINEQIDRMRHSATRALLERDDVIIVASVSCIYGIGSPETYGAMTQEL
IAGNTYDQREFLGDLVTQQYKRNDQAFQRGSFRVRGDSVELWPAHLEDRAWRFSFFGEEL
EDIQEFDPLTGERTAKLERTRIYANSHYVTPRPTINQAIRSIKEELRRRLDQFVSEGKLL
EAQRLEQRTNFDIEMLEATGVCNGIENYSRYLTGRAPGEPPPTLFEYIPDNAIVFADESH
VSVPQIGGMFKGDYRRKFTLAEHGFRLPSCMDNRPLKFEEWDAMRPQSVFVSATPGKWEM
EQTGGVFAEQVIRPTGLIDPPVEIRPVSMQVDDLLDEVRKVAAQGNRALVTTLTKRMAED
LTEYLHEQGIRVRYMHSDIDTIERIEILRDLRLGAFDVLIGINLLREGLDIPECALVAIL
DADKEGFLRSETSLVQTIGRAARNSEGRVIMYADKMTGSMERAIGETNRRREKQEAYNLA
HGITPETIRKNVEDILDGVWAGDTDQSRITAKTGAKALVGGNLQAHLDALRKEMMKAAEN
LEFEEAARLRDEVKRLEAVELAVADDPLARQAAVEAASSPRTGRSTAGKGGTRAYRGQSK
KKAF
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgacgccctgaccaccgttccgcaggatccgcaacgccacaagaccgagggt
ggcaagcggatcgtgatggaatcacccttccagccggcgggggaccagccgaccgcgatc
gccgagctggtcgccggcgtgcagtcgggggaacgcgaccaggttctgctcggcgccacc
ggcaccggcaagaccttcaccatggccaagatcatcgaagccacccagcgcccggcaatc
atcctggcaccgaacaagaccctcgcggcgcagctctacggagagttcaagaatttcttc
ccgtacaacgccgtggagtatttcgtctcctactacgactactaccagccagaagcctat
gtggcccgcaccgatacgttcatcgagaaggaaagccagatcaacgagcagatcgaccgg
atgcgccactcggccacccgcgcgctgctggagcgcgacgacgtgatcatcgtggcctcc
gtctcctgcatctacggcatcggctcgccggaaacctatggcgcgatgacccaggagctg
atcgccggcaacacctatgaccagcgcgaattcctcggagacctcgtcacccagcagtac
aagcgcaacgatcaggccttccagcgcggctcgttccgggtgcggggcgattcggtggaa
ctgtggcccgcccaccttgaggaccgcgcctggcgcttctccttcttcggggaggaactg
gaggacatccaggaattcgaccccctcaccggcgagcgcaccgcgaagctggagcgcacc
cgcatctacgccaactcgcattacgtgaccccgcggcccacgatcaaccaggcgatcagg
tccatcaaggaggagctgcgccgccggctggaccagttcgtctccgagggcaagctgctg
gaggcccagcggctggagcagcgcaccaatttcgacatcgagatgctggaggccaccggc
gtgtgcaacggcatcgagaactactcgcgctacctcaccggccgcgccccgggcgagccg
cccccgaccctgttcgaatacatccccgacaatgcgatcgtgtttgccgatgagagccat
gtctcggttccgcagatcggcggcatgttcaagggcgactaccggcgcaagttcacgctg
gccgaacacgggttccgcctgccctcctgcatggacaaccgcccgctgaaattcgaggaa
tgggacgcgatgcgcccgcagtcggtcttcgtgtcggccacgccgggcaagtgggagatg
gagcagaccggcggcgtgttcgccgagcaggtgatccgccccaccgggctcatcgacccg
ccggtggagatccgccccgtctccatgcaggtggacgacctgctcgacgaggtgcgcaag
gtggccgcccagggcaaccgggccctggtgaccacgctcaccaagcgcatggcggaggat
ctcaccgaatacctgcacgagcagggcatccgcgtgcgctacatgcattcggacatcgac
acgatcgagcgcatcgagatcctgcgcgacttgcggctgggcgccttcgacgtgctgatc
ggcatcaacctgctgcgcgaggggctcgacattcccgaatgcgcgctggtggcgatcctc
gatgcggacaaggaaggcttcctgcgctcggagacctcgctggttcagaccatcggccgc
gcggcgcgcaattccgagggccgggtgatcatgtatgccgacaagatgaccggctccatg
gagcgcgcgatcggcgagaccaaccgccgccgggagaagcaggaagcctacaacctcgca
cacggcatcacccccgagaccatccgcaagaacgtggaggacattctcgacggggtctgg
gccggggacaccgaccagtcgcgcatcaccgcgaagaccggggcgaaggcgctggtgggc
ggcaacctgcaggcgcatctcgacgcgctgcgcaaggagatgatgaaggcggcggagaac
ctggagttcgaggaggccgcccggctgcgcgacgaggtcaagcgcctggaggccgtcgaa
ctggcggtggcggacgaccccctcgcccgacaggccgcggtggaggccgcctcgagcccg
cgcaccggccggtccaccgcgggcaagggcggcacgagggcctatcgcgggcaatcgaag
aagaaggcgttctga
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