Paroceanicella profunda: FDP22_12110
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Entry
FDP22_12110 CDS
T06319
Name
(GenBank) methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00450
Selenocompound metabolism
ppru00970
Aminoacyl-tRNA biosynthesis
ppru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
FDP22_12110
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FDP22_12110
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppru01007
]
FDP22_12110
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppru03016
]
FDP22_12110
Enzymes [BR:
ppru01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
FDP22_12110
Amino acid related enzymes [BR:
ppru01007
]
Aminoacyl-tRNA synthetase
Class I (U)
FDP22_12110
Transfer RNA biogenesis [BR:
ppru03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FDP22_12110
Prokaryotic type
Other AARSs
FDP22_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
Anticodon_3
tRNA-synt_1f
DZR_2
Motif
Other DBs
NCBI-ProteinID:
QDL92458
UniProt:
A0A5B8FHX4
LinkDB
All DBs
Position
complement(2716578..2718290)
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AA seq
570 aa
AA seq
DB search
MARILITSALPYINGIKHLGNLVGSQLPSDAYARFMRARGHEVMLICATDEHGTPAELAA
AKAGKPVDAFCREMWQVQKDIADGFRLSFDHFGRSSSLRNRALTQHFAGKLFEAGLIEEV
SERQVYSNADGRFLPDRYIEGTCPNCGYDKARGDQCENCTKQLDPTDLINPHSAISGSTD
LEVRETKHLYLRQSAMRARLTEWIESKTDWPVLTTSIAKKWLNDGDGLQDRGITRDLDWG
VPVKRGTEDWPGMEGKVFYVWFDAPIEYIAATAEWADAHGLPDSAWQRWWREDMGAGDVR
YVEFMAKDNIPFHTLSFPATIMGSGEPWKLVDYIKGFNWLLYEGGKFSTSQGRGVFMDQA
LEILPSDYWRWWLLSNAPESSDSDFTWEAFQAGVNKDLADVLGNFVSRVTKFCRSKFGET
VPTGGAYGPAEQAVIEAIAPRLKAYEGHMEAIEIRKAAGELRAIWVIGNEYLQSAAPWAS
FKTDPEAAAACVRFALNLIRLYAVLSRPFIPDASSAMLDSMKADDAWPGDLGAALAALPA
GHGFSVPDNLFAKIDDATRLELEDRFGGRD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcatcctcatcacctccgcgcttccctacatcaacgggatcaagcacctgggc
aatctcgtgggctcgcagctgccctcggatgcctatgcccgcttcatgcgggcgcgtggc
cacgaggtgatgctgatctgcgccaccgacgaacacggcacccccgccgaactggccgcc
gccaaggccggcaagccggtggacgcgttctgccgcgagatgtggcaggtccagaaggac
atcgccgacggcttccgcctgagcttcgaccatttcggccgctcctcctccctgcgcaac
cgcgcgctcacccagcatttcgccggcaagctgttcgaggccgggctgatcgaggaggtc
tccgagcgccaggtctattccaacgccgacggccgcttcctgccggaccgctacatcgag
ggcacctgcccgaactgcggctatgacaaggcgcgcggcgaccagtgcgagaactgcacc
aagcagctcgaccccaccgacctcatcaacccgcattccgccatctccggctccaccgac
ctcgaggtgcgcgagaccaagcacctctacctgcgccagtccgccatgcgcgcccgcctc
accgagtggatcgagagcaagaccgactggccggtgctcaccacctccatcgcgaagaag
tggctcaacgacggcgacgggttgcaggaccgcggcatcacccgcgacctggactggggc
gtgccggtgaagcgcggaaccgaggactggccgggcatggagggcaaggtcttctacgtc
tggttcgacgcgccgatcgaatacatcgccgctaccgccgaatgggcggacgcgcacggc
ctgcccgacagcgcctggcagcgctggtggcgcgaggacatgggcgccggggatgtccgc
tacgtggagttcatggccaaggacaacatccccttccacaccctctccttcccggccacc
atcatgggctcgggcgagccgtggaagctggtggactacatcaagggcttcaactggctg
ctctacgagggcggcaagttctccacctcgcagggccgcggcgtgttcatggaccaggcg
ctggagatcctgccctcggactactggcgctggtggctcctgtccaacgcccccgagagc
tcggacagcgacttcacctgggaggccttccaggccggcgtgaacaaggacctcgccgac
gtgctgggcaatttcgtctcgcgcgtcaccaagttctgccgctccaagttcggcgagacc
gtgcccacgggcggtgcctacggcccggccgaacaggccgtcatcgaggccatcgccccg
cgcctgaaggcctatgagggccacatggaggcgatcgagatccgcaaggccgccggtgag
ctgcgcgcgatctgggtgatcggcaacgaatacctgcaatccgccgcgccctgggccagc
ttcaagaccgacccggaggccgccgcggcctgcgtgcgattcgcgctcaacctcatccgg
ctctacgcggtgctctcgcgccccttcattccggatgcatcctccgctatgctcgactcg
atgaaggccgacgatgcctggcccggcgatctcggcgcggccctggccgccctgcccgcc
ggacacggcttcagcgtgccggacaatctctttgccaagatcgatgacgcgacgcgcctc
gagcttgaggaccgcttcggcgggcgcgactga
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