Paroceanicella profunda: FDP22_12970
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Entry
FDP22_12970 CDS
T06319
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppru03032
]
FDP22_12970 (gyrA)
03400 DNA repair and recombination proteins [BR:
ppru03400
]
FDP22_12970 (gyrA)
Enzymes [BR:
ppru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FDP22_12970 (gyrA)
DNA replication proteins [BR:
ppru03032
]
Prokaryotic type
DNA Topoisomerases
FDP22_12970 (gyrA)
DNA repair and recombination proteins [BR:
ppru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FDP22_12970 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QDL92618
UniProt:
A0A5B8FI29
LinkDB
All DBs
Position
complement(2893026..2895809)
Genome browser
AA seq
927 aa
AA seq
DB search
MGRVAYTPSTRCREKSRALADDTDTPEDDLPQRPDHSGPVISVEQEMKRSYLDYAMSVIV
SRAIPDVRDGLKPVHRRILYAMHETGNTHEKGYRKSARPVGDVMGKYHPHGDSAIYDALV
RMAQDFSMRLPLLDGQGNFGSMDGDSPAAMRYTEVRMDKPAAYILADIEKDTVDFQPNYD
NQDREPSVLPARFPNLLVNGAGGIAVGMATNIPPHNLGEVIDATLALMERPDLTSLDLME
YVPAPDFPTGALILGRTGAKKAYTEGRGSVIMRSKTRIEEIRKDRFAIVVEEIPYQVNKS
VMIEKIAELARDKRIEGIAHVQDESDRFGVRVVIELKRDATPDVVLNQLYRFTPLQTSFG
CNMLALNGGRPEQMELKRFLTAFITFREEVVARRTAFELRRARERAHVLCGLAVAVENVD
EVVQTIRSSPDPATARARLMERRWPAEQIAGYIALIDDPTHKMNEDGTYFLSDTQARAIL
ELRLQRLTALGVKEVTDELQELAAKIADYLAILRSRERIMEIISNELLEVKEKFATPRRS
EIVEFEGEMEDEDLIEREDMVVTVTHGGYIRRTPLDEYRAQKRGGKGTQGMNMKDEDFVT
TLFVANTHTPLLFFTTDGMVYKLKTWRLPRGSRNSRGKAIVNILPIQPGTGIAAIMPVDR
DEADWADLQIVFATSQGDVRRNQLSDFTNVMRNGKIAMRLPEGVSLVNARICSEEDDIML
TTAFGKAIRFQTTEVRVFKGRDSTGVRGVRLAEGDKVVSAAVIRHFEASSEERQAYLKMR
RAVAGIPDEEAETDNEDGVAGDITPERYAEMSAAEELLLTLTEKGSGKLSSSHDYPVRGR
GGQGVTAMDKAMRGGPLVASFPVSMDDQIMLVTSAGQLIRCPVDNISFRSRSAGGVRVFN
TAPGERVVSVAWIAETGDEGEESEPEA
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggggcgggtggcctatactccgtccacaagatgtagagaaaagagcagagctttggcc
gacgataccgacaccccggaagacgacctgccccagcgcccggaccattccggcccggtg
atctccgtcgagcaggagatgaagcgcagctatctcgactacgcgatgagcgtgatcgtg
agccgcgccatccccgatgtgcgcgacggattgaagcccgtgcaccggcgcatcctctat
gccatgcacgagaccggcaacacccacgagaagggctaccgcaagtcggcccgcccggtg
ggcgacgtgatgggtaagtatcacccccacggcgacagcgcgatctacgacgctctcgtg
cgcatggcgcaggacttctccatgcggctgccgctgctcgacggccagggcaacttcggc
tcgatggacggcgattccccggccgccatgcgctacaccgaagtgcgcatggacaagccg
gccgcctatatcctcgcggatatcgagaaggacacggtcgacttccagccgaactacgac
aaccaggaccgcgagccctccgtgctgcccgcgcgctttcccaacctgctggtgaacggc
gccggcggcatcgcggtgggcatggccaccaacattccgccgcacaacctcggtgaggtg
atcgacgccacgctggcgctgatggagcgcccggatctcacctcgctcgacctgatggaa
tacgtgccggcgccggactttcccaccggcgcgctcatcctggggcgcaccggggcgaag
aaggcctataccgaggggcgcggctcggtcatcatgcgctcgaagaccaggatcgaggag
atccgcaaggaccgcttcgccatcgtggtcgaggagatcccctaccaggtgaacaagtcg
gtgatgatcgagaagatcgccgagctggcccgggacaagcgcatcgagggcatcgcccat
gtgcaggacgagagcgaccgtttcggcgtgcgcgtcgtcatcgagctgaagcgcgacgcc
acgccggacgtggtgctgaaccagctctaccgcttcaccccgctgcagacctcgttcggc
tgcaacatgctggcgctgaatggcggccggccggagcagatggagctcaagcgcttcctc
accgcgttcatcaccttccgcgaggaagtggtggcccggcgcaccgcctttgagctgcgc
cgcgcgcgcgaacgcgcccatgtgctgtgcggcctcgccgtggcggtggagaacgtggac
gaggtggtgcagaccatccgctcctcccccgaccccgccaccgcccgcgcccggctgatg
gagcgccggtggccggccgagcagatcgcgggctacatcgcgctgatcgacgaccccacc
cacaagatgaacgaggacggcacctacttcctgtccgacacccaggcccgcgccatcctg
gagctgcgcctgcagcgcctcaccgcgctcggcgtgaaggaagtgaccgacgagctgcag
gagctcgcggcgaagatcgccgattacctcgccatcctgcgctcgcgcgagcggatcatg
gagatcatctccaacgagctcctcgaggtgaaggagaagttcgccaccccccgccgctcc
gagatcgtggagttcgagggcgagatggaggacgaggacctcatcgagcgtgaggacatg
gtggtgaccgtgacccatggcggctacatccgccgcaccccgctggacgagtaccgggcc
cagaagcgtggcggcaagggcacgcagggcatgaacatgaaggacgaggatttcgtcacc
accctgttcgtggccaacacccacacgccgctcttgttcttcaccaccgacggcatggtc
tacaagctcaagacctggcgcctgccccgcggcagccgcaattcccgcggcaaggccatc
gtgaacatcctgcccatccagccgggcaccggcatcgccgcgatcatgccggtggaccgc
gacgaggcggactgggcggacctgcagatcgtcttcgccacctcgcagggcgacgtgcgc
cgcaaccagctctccgacttcaccaacgtgatgcgcaacggcaagatcgccatgcgcctg
cccgaaggggtgagcctggtgaatgcgcgcatctgctcggaggaggatgacatcatgctc
accaccgccttcggcaaggcgatccgcttccagaccacggaggtgcgcgtgttcaagggc
cgcgattccaccggcgtgcgcggcgtgcggctggcggagggcgacaaggtggtctccgcc
gccgtcatccggcatttcgaggcctcctccgaggagcgtcaggcctacctcaagatgcgc
cgcgccgtggccggcattccggacgaggaagccgagaccgacaacgaggacggcgtggcc
ggggacatcacgccggagcgctacgcggaaatgtcggcggccgaggaactgctgctcacc
ctcaccgagaaagggtcgggcaagctctcgtcgagccatgactacccggtgcgcgggcgc
gggggccagggtgtcaccgcgatggacaaggcgatgcgcggcggcccgctggtcgcctcc
ttcccggtgtcgatggatgaccagatcatgctggtcaccagcgccggccagctcatccgc
tgcccggtggacaacatctccttccggtcgcgctctgccggcggcgtgcgggtgttcaac
accgccccgggcgagagggtcgtctccgtcgcctggatcgccgagaccggagacgagggc
gaggagagcgagcccgaggcgtga
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