Paroceanicella profunda: FDP22_13425
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Entry
FDP22_13425 CDS
T06319
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00550
Peptidoglycan biosynthesis
ppru01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
FDP22_13425 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppru01003
]
FDP22_13425 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppru01011
]
FDP22_13425 (pbpC)
Enzymes [BR:
ppru01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
FDP22_13425 (pbpC)
Glycosyltransferases [BR:
ppru01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
FDP22_13425 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
ppru01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
FDP22_13425 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QDL93719
UniProt:
A0A5B8G2W8
LinkDB
All DBs
Position
complement(2991999..2993996)
Genome browser
AA seq
665 aa
AA seq
DB search
MSETVVDREGRLLRAYTVENGTWRLPVTPRAVDPGYVAQLLAWEDRRFARHRGVDWLALV
RASGQALAQGRIVSGGSTLTMQVARLLEHGPSGSLPAKIRQIRLALALERRLDKQEILAL
YLARAPFGGNVEGVRAASLSWFGHEPARLSPAEAALLVALPQAPESRRPDRFPEAARTAR
DRVLARAAARGLIDARSLAAARAAPVPRARIAFPMHAPHLADRLRSRDGARHATTLDGAL
QARLETLVSERARALGPGLSAALIVADHATGEILAEIGSADYLDTPRRGFVDMTRAPRSP
GSLLKPLIYGLAFEAGIAHPETLIDDAPMRFGSYEPQNFDRRFHGTVSLRTALQMSLNIP
AVALLEAVGPAQLMARMRRAGAQPVLPHGSGPPGLAIGLGGLGLSLSDLVTLYAGIARGG
TPVRLSAQPGEAGAAPGPRLLSATAAWQVADVLAGVAPPPVAAPRRIAYKTGTSYGSRDA
WAIGFDGAHVIGVWIGRADAAAVPGALGAHEAAPLLFEAFGRLGAPAVALPPPPGPVLTL
ATAELPPPLRRFRPRNAALAPAPGPEIAYPPDGARILLAPGPDAALLIRVRDGRPPYTWL
VDGRPLDTRPFDRSASWTPQGPGFVSISVIDAAGAATRARVRLDMPVTQADPACAGALRP
ASCTR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtcggagacggtggtggaccgggagggcagactgctgcgcgcctatacggtggagaac
ggcacctggcgcctgcccgtcacgccccgggcggtcgacccgggctatgtcgcgcagctg
ctcgcctgggaggaccggcgcttcgcccgccaccgcggcgtggactggctggcgctggtg
cgcgcgtccgggcaggccctggcgcaggggcgcatcgtctcgggcggttccaccctcacc
atgcaggtggcgcggctgctggagcacgggccgagcggcagcctgccggcgaagatccgc
cagatccgcttggccctcgcgctggagcgacggctggacaagcaggagatcctcgcgctc
tacctcgcccgggcgcccttcggcggcaatgtcgagggggtgcgcgccgcgagcctgagc
tggttcgggcatgagccggcccggctctcgcccgcggaggcggcgctgctggtcgccctg
ccgcaagcgcccgagagccgccggccggaccggtttcccgaggccgcgcggacagcgcgc
gaccgggtgctggcccgggccgcggcgcgcgggctgatcgatgcgcgcagtctcgcggcc
gcccgcgccgcgccggttccccgcgcccgcatcgcctttccgatgcatgccccccacctc
gccgaccggctgcgcagccgggacggcgcccgccatgccaccacgctcgacggcgccctg
caggcgcggctggaaaccctggtctccgagcgggcccgcgcgctggggccggggctgtcc
gcggcgctgatcgtggccgatcacgcgaccggcgagatcctcgcggagatcggttcggcc
gattatctcgacacgccccggcgcggcttcgtcgacatgacgcgggcgccgcgctcgccc
ggttcgctgctgaaaccgctgatctacgggctcgccttcgaggccggaatcgctcatccc
gagacgctgatcgacgatgcgcccatgcgcttcggcagctacgagccgcagaatttcgac
cgccggttccacggcacggtgagcctgcgcaccgccttgcagatgtcgctgaacatcccg
gccgtggcgctgctggaggcggtggggccggcgcagctcatggcacggatgcggcgcgcc
ggggcgcagcccgtgctgccgcatggctccggcccgccgggcctcgcgatcgggctcggg
ggcctcggcctgtcactgagcgacctggtgacgctctacgcaggcatcgcgcgcggcggc
acgccggtgcggctctccgcgcagccgggggaggcgggcgcggcgccggggccgaggctg
ctctccgccacggcggcctggcaggtggcggacgtgctcgccggggtcgcgccgcccccg
gtggccgcgccccggcgcatcgcctacaagaccggcacctcctacggcagccgtgacgcc
tgggccatcggcttcgacggcgcccatgtgatcggggtgtggatcggccgcgccgacgcg
gcggcggtgccgggggcgctcggcgcgcacgaggccgcgccgctgctgttcgaggccttc
gggcgcctcggcgcgcccgcggtcgcgctgccgccgccgccggggccggtgctcacactg
gccaccgccgagctgccgccgccgctgcgccggttccgcccgcgcaacgccgcgctcgcg
ccggcgcccggccccgagatcgcctatccgccggacggcgcgcgcatcctgctggccccg
ggccccgacgcggccctgctcatccgcgtgcgcgacgggcggccgccctacacctggctg
gtcgatggccggccgctggacacccgccccttcgaccgctccgcgagctggacgccgcag
ggccccggcttcgtctccatctcggtgatcgacgcggccggtgccgccacccgcgcccgg
gtgcggctcgacatgccggtgacacaggcggacccggcctgcgccggcgcgctccgcccg
gcctcctgcacacgctga
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