Paroceanicella profunda: FDP22_13905
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Entry
FDP22_13905 CDS
T06319
Name
(GenBank) form I ribulose bisphosphate carboxylase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
ppru
Paroceanicella profunda
Pathway
ppru00630
Glyoxylate and dicarboxylate metabolism
ppru00710
Carbon fixation by Calvin cycle
ppru01100
Metabolic pathways
ppru01110
Biosynthesis of secondary metabolites
ppru01120
Microbial metabolism in diverse environments
ppru01200
Carbon metabolism
Module
ppru_M00165
Reductive pentose phosphate cycle (Calvin cycle)
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FDP22_13905
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
FDP22_13905
Enzymes [BR:
ppru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
FDP22_13905
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-ProteinID:
QDL92783
UniProt:
A0A5B8G2E7
LinkDB
All DBs
Position
complement(3112039..3113502)
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AA seq
487 aa
AA seq
DB search
MLDDKKTELRGKERYRAGVLKYAQMGYWDGDYTPKDTDLIALFRITPQEGVDPIEAAAAV
AGESSTATWTVVWTDRLTACDQYRAKAYRVDQVPGTPGQYFVYIAYDLILFEEGSIANLT
ASIIGNVFSFKPLKAARLEDMRLPVAYVKTFKGPPTGIVGERERLDKFGKPLLGATTKPK
LGLSGKNYGRVVYEGLKGGLDFMKDDENINSQPFMHWRDRFLYCMEAVNRAQAETGEVKG
HYLNITAGTMEEMYRRAEFAKELGSVIVMVDLIIGYTAIQSISEWCRQNDMILHMHRAGH
GTYTRQKNHGISFRVIAKWLRLAGVDHLHCGTAVGKLEGDPPTVQGYYNVCREIRNEVDL
ARGIFFEQDWGDIRKVMPVASGGIHAGQMHQLLDLFGDDVVLQFGGGTIGHPMGIQAGAT
ANRVALEAMVLARNEGRDIAAEGPEILRAAAKWCKPLEAALDTWGNISFNYTPTDTSDFV
PDMTPAL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgacaagaaaaccgaactgcgtggcaaggaacgctaccgcgccggcgtgctg
aaatatgcccagatgggctactgggacggtgattacaccccgaaggacactgacctgatc
gccctcttccgcatcacgccgcaggagggggtggacccgatcgaggccgccgcggccgtg
gccggcgaaagctccaccgccacctggaccgtggtctggaccgaccggctcaccgcctgc
gaccagtatcgcgccaaggcctaccgggtggaccaggtgccgggcacgccggggcagtat
ttcgtctacatcgcctatgacctgatcctgttcgaggaaggctccatcgccaacctcacc
gcctcgatcatcggcaacgtgttctccttcaaacccctgaaggcggcgcggctggaggac
atgcgcctgccggtggcctatgtgaaaaccttcaagggcccgcccaccggcatcgtgggc
gagcgcgagcggctcgacaagttcggcaagccgctgctgggcgccacgacgaagcccaag
ctgggcctgtcgggcaagaactacggccgcgtggtctacgaggggctgaagggcgggctc
gacttcatgaaggatgacgagaacatcaactcgcagcccttcatgcactggcgcgaccgg
ttcctctactgcatggaggcggtgaaccgcgcccaggccgagaccggcgaggtgaagggc
cattacctcaacatcaccgccggcacgatggaggagatgtaccgccgcgccgagttcgcg
aaggaactgggatcggtgatcgtgatggtcgacctcatcatcggctacactgccatccag
tccatctccgaatggtgccggcagaacgacatgatcctgcacatgcaccgcgccggccac
ggcacctacacccggcagaagaaccacggcatctccttccgcgtcatcgcgaaatggctg
cggctggcgggggtggaccacctgcactgcggcaccgccgtgggcaagctggagggcgac
ccgcccaccgtgcagggctactacaacgtctgccgcgagatccgcaacgaggtggacctc
gcccgcggcatcttcttcgagcaggactggggggacatccgcaaggtgatgccggtggcc
tcgggcggcatccacgccggccagatgcaccagcttctggacctcttcggcgatgacgtg
gtgctgcagttcggcggcggcaccatcggccacccgatgggcatccaggccggagccacg
gcaaaccgcgtggcgctggaggcgatggtgctcgcccgcaacgagggccgcgacatcgca
gccgagggcccggagatcctccgcgccgccgcgaaatggtgcaagccgctggaggccgcc
ctcgatacctggggcaacatctccttcaactacacgcccaccgacacgtcggacttcgtg
cccgacatgacccccgccctgtaa
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