Paroceanicella profunda: FDP22_14425
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Entry
FDP22_14425 CDS
T06319
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
Organism
ppru
Paroceanicella profunda
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_M23
LysM
LysM1_NFP_LYK
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
QDL92872
UniProt:
A0A5B8G1C6
LinkDB
All DBs
Position
complement(3227773..3229083)
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AA seq
436 aa
AA seq
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MFANHSRIRSVLLTGVAAATLAACSGGDREQSPADVTYQGSQPGSAAPGAPAGGQPDSRG
VITYPDYQVVIARDGDTLEGIANRIGIPVAGLASYNGLPTSWRPRRGDTLVIPPDQQVQA
TPAPMTSYAPAIAAVPPLSGGSAPAETLYSAAPLTSPGPAPASPGSASAWSPELAESAIE
RAGTGGATAVPGIGTGSSLASDGQQTAGLQPVSHTVSPGETVYSISRLYNVPVSAIADLN
NLGRDYTVRPGQRLSIPMTATANTTTVSADSVYVPGGQPEQMATPPSAADPLPAPLPQAV
VPASPQLDQYRSNAPTTGVRLSSPVKGSVSKGYAPSGADRNDGIDFAAPAGSPVMAADDG
EVALISNSLGGFGKILLIRHAGGLTTVYGRVDDVQVSKGDIVGRGQVIGSVAPADQPSLH
FEVRRGAESVDPAGYL
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcaaaccatagtagaattcgttctgtcctgctgaccggcgtggcggctgccacg
cttgccgcctgtagcggcggcgaccgggaacaatcccccgccgatgtcacctaccagggc
agccagcccggatccgccgcccccggcgcaccggccggcggccagcccgattcccgaggc
gtgatcacctatcccgactatcaggtcgtcatcgcccgcgacggagacacgctcgagggg
atcgcgaaccgcatcggcatcccggtggccggtctcgcctcctacaacggcctgcccacg
agctggcggccgcggcggggcgacacgctggtgatcccccccgaccagcaggttcaggcc
accccggcgccgatgacctcctatgccccggcgatcgccgcggtcccgccgctcagcggc
ggcagcgccccggcggagacgctctattccgcagcaccgctcacctcccccggccccgcg
cccgccagccccggcagcgcctcggcctggagcccggaactcgcggagagcgccatcgag
cgcgcgggcacgggcggggccaccgccgtgcccggcatcggcaccggcagcagcctcgcc
tccgacggccagcagacggccggcctccagccggtgagccacaccgtgtcgccgggcgag
acggtgtattcgatttcccggctctacaacgtgccggtgagcgccatcgccgatctcaac
aacctggggcgggactacaccgtgcgcccgggccagaggctcagcattccgatgacggcc
accgcgaacaccaccacggtcagcgccgacagcgtctacgtgcccggcggccagcccgag
cagatggcaacgccgccgagcgccgccgacccgctgcccgcgccgctgccccaggcggtg
gtgccggcctcgccgcagcttgaccagtaccgcagcaacgcgcccaccaccggcgtgcgc
ctgtccagcccggtgaagggcagcgtctccaaaggctacgccccctccggcgccgaccgc
aatgacgggatcgacttcgccgcccccgccggcagcccggtgatggccgcggacgacggc
gaggtggcgctaatctcgaattcgctgggcgggttcggcaagatcctgctgatccgccat
gccggcgggctcaccaccgtctacggccgcgtcgacgacgtgcaggtctccaagggcgat
atcgtcggccggggccaggtgatcggctccgtcgcgccggcggaccagccctcgctgcat
ttcgaggtgcgtcgcggagcggaaagcgtggatccggccggctatctctga
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