Paroceanicella profunda: FDP22_14690
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Entry
FDP22_14690 CDS
T06319
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
ppru
Paroceanicella profunda
Brite
KEGG Orthology (KO) [BR:
ppru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppru01002
]
FDP22_14690
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppru01011
]
FDP22_14690
Peptidases and inhibitors [BR:
ppru01002
]
Cysteine peptidases
Family C82
FDP22_14690
Peptidoglycan biosynthesis and degradation proteins [BR:
ppru01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FDP22_14690
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
QDL92922
UniProt:
A0A5B8G1G8
LinkDB
All DBs
Position
complement(3292270..3294087)
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AA seq
605 aa
AA seq
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MLLNRTFLGAFLLGTASLIPFQAAFAQSAGDPEVYVDRPRTAITAPLAGTPGAAAPGERV
RTNGVAPVIDTSPLGQALRRAGVTDPAVAVFYAARDNRPFWTGADHGWAEALLASLRHAP
DQGLPENLLDPQGLSVALATGGPDAEARFMKAYLSFGRIVSSGLLNPEKVDDEIHFQPVR
PVPARLLASLHAEGTAPASLDFLAPDLPEYRTLVQELARYRTLASEAVLGGTVPEGPTLR
PGDRSPRVAALRDRLQALGDVGLAMPATAIMEQLTDAAATAPQPQQNRPIQAAAGSGPVP
GVDRTYFDPELEAAVKRFQLRNGLIDDGAVGPQTLRTINTSAADRYNRILVNLERVRWLH
RDMNERHIFVNQADFTMELIENNQVLLASRVVVGQTPKHRTPEFIEMMDHIVVNPTWHVP
TSIATKEILPKLKQDPTYLARNGMRLVPTGADPVPDGVTSDYSLYSRGYFPFRVKQEPGD
ENSLGRVKFMFPNKYAIYLHDTPSKSLFNRDARAFSHGCVRVQRPFDLAYALLQGQVADP
KASFDGWLDSGKERRVNLDRPVRMYLTYRTVWVDRQGEVQFRNDIYGRDARTIAALSAAG
VETLD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgaaccgcaccttccttggcgccttcctgctcggaaccgcctcattgattcca
tttcaggctgccttcgcccagtccgcaggggatccggaagtctatgtcgaccgtccgcgg
acggcgatcaccgctccgctcgcaggcacgcccggcgcggcggctcccggcgagcgggtg
cgcaccaatggtgtcgcgccggtgatcgacacgtccccgctgggtcaggcgctgcgccgg
gcaggggtgacggaccccgccgtcgcggtgttctatgccgcgcgggacaaccggccgttc
tggaccggagcagaccacggctgggccgaggcgctgctcgcctcgctgcgccacgcgccg
gaccagggcctgccggagaacctgctcgacccccaggggctgagcgtggccctggcgacc
ggagggccggacgccgaggctcggttcatgaaggcctatctctccttcggacgcatcgtg
tcctcggggctgctgaacccggagaaggtggatgacgagatccacttccagcccgtgcgc
cccgtgccggcccggctgctggccagccttcatgccgagggcaccgcgcccgcctcgctc
gatttcctcgccccggacctgccggaataccgcacgctggtccaggagctggcgcgctac
cggacgctcgcctccgaggccgtgctgggcggcaccgtgcccgaggggcctaccctgcgt
ccgggagaccgctcgccgcgggttgcggcgctgcgtgaccggctgcaggcgctcggcgat
gtcgggctcgccatgccggccaccgcgatcatggaacagctgaccgacgcggccgccaca
gctccgcagccgcagcagaaccgcccgattcaggccgcggccggctccggccccgtgccg
ggggtcgaccggacctatttcgacccggaactggaagccgcggtgaagcgcttccagctg
cgcaacggcctcatcgacgacggcgccgtcggcccgcagaccctgcggaccatcaacacc
tccgccgctgaccgctacaaccgcatcctggtgaacctggagcgcgtgcgctggctgcac
cgcgacatgaacgagcggcacatcttcgtgaatcaggccgatttcacgatggagctcatc
gagaacaaccaggtgctgctggccagccgtgtggtcgtggggcagaccccgaagcaccgg
accccggaattcatcgagatgatggaccacatcgtggtcaacccgacctggcacgtgccc
accagcatcgcgacgaaggagatcctgcccaagctgaagcaggaccccacctaccttgcg
cgcaacggcatgcgcctcgtgcccaccggcgcggacccggtgccggacggggtgacctcg
gattactcgctctactcgcgcggctatttccccttccgcgtgaagcaggagccgggagac
gagaactcgcttggccgggtgaagttcatgttcccgaacaagtacgccatctatctgcat
gacacgccgtccaaaagcctgttcaaccgtgacgcgcgggccttcagccacggctgcgtg
cgggtgcagaggcccttcgatctggcctatgccctgctccagggccaggtggcggacccg
aaggcgagcttcgacggctggctggacagcggcaaggagcgccgggtgaacctcgaccgc
ccggtgcggatgtatctcacctaccgcaccgtctgggtggaccgccagggcgaggtgcag
ttccgcaacgacatctacgggcgcgacgcgcgcaccatcgccgcgctctccgcggccggg
gtggaaaccctcgactga
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